Megalobrama amblycephala (Wuchang bream): 125247565
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Entry
125247565 CDS
T08212
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125247565 (lingo1a)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125247565 (lingo1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
125247565
NCBI-ProteinID:
XP_048014882
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All DBs
Position
LG15:29570152..29679404
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AA seq
621 aa
AA seq
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MRVTGRMVAGEVSGHSFLVACWQPILILMLGTVLSGSATGCPSRCECNAQERSVLCHRKK
LMSVPEGIPSETRLLDLSKNRIKTINPDEFSAFPHLEELELNENTISAIEPGAFNNLYGL
QTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVF
ISHRAFHGLSSLEQLTLERCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRL
KVLEIANWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPIQM
IEGNRLHDLLRLQEFHLVGGRLIMIEPYSFRGLNYLKILNVSSNALTTLEEAVFHSVGNL
ETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPTCSSPEFVQGKEFKDFPDVLQPNYFTC
RKSRIRDRKPQQKFVDEGTTIHFVCQADGDPTPVIMWLSPQKQFITTKTIGRLTVFPDGT
LEVRYAQIQDNGTYVCIASNAGGNDTALAHLHVHSYSPDWPNQPNKTLAFISNQPNDNGA
NGTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNSKHNIEIEYVPRK
SDAGMSSSGADAPRKFNMKMI
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagggtaaccggtaggatggtagcaggggaagtgagtgggcacagcttcctggtggca
tgctggcagcccattctaatcttgatgctgggcacagtgctgtctggctctgccacgggc
tgcccatcacgctgcgagtgcaacgctcaggagcgctcggtcttatgccaccgcaagaag
ctgatgtccgttccagagggaatcccgtcggaaacacgactcctggacctcagcaagaat
cgaatcaaaaccatcaacccagatgagttctctgcctttccgcacttggaagagctggag
ctcaatgaaaacaccatctcggccattgagcccggcgcctttaacaatctctacggcctg
cagactctgggactacgcagcaacaagcttaagctcatccagttgggagtgttcacaggc
ctcagtaacctaacaaagctggacatcagtgaaaataagatcgtaattctgctggactac
atgttccaggacctctacaacctgcgctctctggaggttggggataatgaccttgtcttc
atatcccaccgggcatttcatggcctcagtagcttggagcagcttacgctagaaaggtgc
aacctgacctctgtcccgacagaggccttcacgcatctgcacagcttggttacgctgcgc
ttgcgaaacctcaacatcaacagcatcagagattacagcttcaagcggctctaccgtctg
aaagtcctggagatcgccaactggccctacctggataccatgaccaccaactgcttgtat
ggattgaatcttacctccctaaccatcactaatgcaaacttgacctcgattccatatttg
gctttgcgacacctggtttatcttcgtttcctcaacatgtcctacaatcccatccagatg
attgagggcaaccggctccatgacctgctcagactgcaggagttccacctggtgggcggt
cgactgataatgatcgagccctattccttcagaggactaaactacctgaaaatcctcaat
gtctccagcaatgcccttaccaccctggaggaggctgtgttccattcggtggggaaccta
gagaccctcgcgttgtatgacaacccgctggcttgtgactgccgtctgctttgggttttc
cgacgtcgctggaggctcaacttcaaccgccagcagccgacttgctcctcacccgagttc
gttcaaggaaaagagttcaaggactttcctgacgtgctccagcccaattacttcacgtgt
cgcaagtctaggattcgagaccggaagccacagcagaagtttgttgacgaaggcaccacc
atccactttgtgtgtcaagcggacggagacccgactcctgtcatcatgtggctttcccca
cagaaacagttcatcaccacgaaaacgataggacggctcactgttttcccagatggcacc
ctggaggtgcgctatgctcagattcaggacaatgggacttatgtgtgcattgccagcaac
gctggtggaaatgacaccgctttggcccacctgcatgtccacagttactcaccagactgg
cccaaccaacctaacaaaaccctggcgtttatctccaaccaacccaatgacaacggagcc
aatgggacgagagcaacagtcccgttcccgtttgatataaagacgctaatcatcgccacc
actatgggtttcatatccttcttgggtgtggttctgttctgcctggttctactctttctt
tggagcagaggcaaaggcaacagcaaacacaacattgagatagagtacgtcccgcgcaaa
tcggacgctgggatgagcagcagcggcgccgatgcccctcggaaatttaacatgaaaatg
atataa
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