Megalobrama amblycephala (Wuchang bream): 125247591
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Entry
125247591 CDS
T08212
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04620
Toll-like receptor signaling pathway
mamb04621
NOD-like receptor signaling pathway
mamb04622
RIG-I-like receptor signaling pathway
mamb04623
Cytosolic DNA-sensing pathway
mamb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125247591 (irf7)
04621 NOD-like receptor signaling pathway
125247591 (irf7)
04622 RIG-I-like receptor signaling pathway
125247591 (irf7)
04623 Cytosolic DNA-sensing pathway
125247591 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125247591 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125247591 (irf7)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
125247591 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
125247591
NCBI-ProteinID:
XP_048014926
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All DBs
Position
LG15:12445709..12455002
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AA seq
445 aa
AA seq
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MRETSEPCKLRGSKAVSGPEVMAAMQSSTIGKPQFGPWLIEQVESGRYEGVRMIGNDIFR
IPWKHNSRKDLGDEDIKIFKEWAVVSGKINEHPNDKAKWKTNFRCALYSLKNFEMLEDHS
KDPDDQHKVYRIIRPQNHQEVQSAEPVQLPLPFISEVFSTNDYMPEDMEQELLSQVETMH
LNPQSAETQPWDCSQQNIQTTSRSYFGTPYPDQCMQNNMPDPVQQPYTTAQQWNVPALCD
LEISINYRRTEVLKTRLCSSLVQFYYQCDPSELIGEPIRFPTTEGLIDHKQIQFTKRILD
SIQRGLQLEVNQYGIYGFRQDKCKVFVSTSDPSEIQNPEPRKLHQNSKEQLFSFDKYIKD
LVDFKENRRGSPDYTIYLCFGEKLPDGKPLEKKLITVKVVPLICRELHERAQMEGASSLR
DNVSLQISHNSLFDLINSLGLPSMD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagagagacgtcagagccatgtaaactccgcggtagtaaagctgtttcaggacccgaa
gttatggcagcgatgcagagcagcacaatcggcaaacctcaattcggcccatggcttata
gagcaggtggaaagtgggcggtatgagggagtgcgcatgataggcaatgacatatttcgc
atcccttggaaacacaactctagaaaagaccttggggacgaggatatcaaaatatttaag
gagtgggctgtggtcagtgggaagatcaacgagcaccctaacgacaaagccaaatggaag
acaaatttccgttgtgcgctttatagtctgaaaaactttgagatgttagaggatcactcc
aaagatccggacgaccaacacaaagtctatcgcattatccgtcctcaaaatcaccaagag
gtacagagtgcagagccagttcaacttccgctaccattcatttctgaggtcttcagcaca
aatgattacatgcctgaagacatggagcaggaattgctcagccaggtggagacaatgcat
ctaaatccacaatctgcagaaacccaaccatgggactgttcccaacaaaacatacagact
acctcgaggagctactttgggaccccatacccagaccaatgcatgcagaacaacatgcct
gacccagtccagcaaccctacactactgcacagcaatggaacgttcctgctctctgcgac
ctggagatctcgatcaactacagaagaacagaagttttgaaaactcgcctgtgttcgtca
ctcgttcagttttactaccagtgtgacccatctgagctgataggagagccaatacgcttc
ccaaccactgagggtctgatcgaccacaaacagattcagtttactaaacgcattctagac
agcattcagagaggtctgcagctggaggtgaaccagtatggcatctacggcttccgtcag
gacaagtgtaaagtctttgtcagcaccagtgacccatctgagatccagaacccagagccc
agaaaactgcatcagaactccaaggagcaactgttcagttttgataagtacataaaagat
ctggtggattttaaagagaacagacgggggtctccagattacaccatctacctgtgcttt
ggggagaagctccctgatggaaaaccactagagaaaaaactcatcactgtcaaagttgtc
cctctgatatgccgcgaactacatgaaagagctcaaatggagggagcgtcctctcttcga
gataacgttagcttgcagatctcccacaacagcctttttgaccttataaattctttgggt
ctgccttcaatggactaa
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