Megalobrama amblycephala (Wuchang bream): 125247690
Help
Entry
125247690 CDS
T08212
Symbol
snx1a
Name
(RefSeq) sorting nexin-1a
KO
K17917
sorting nexin-1/2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125247690 (snx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125247690 (snx1a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125247690 (snx1a)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Macropinocytosis
Sorting nexins
125247690 (snx1a)
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125247690 (snx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
DUF1149
Motif
Other DBs
NCBI-GeneID:
125247690
NCBI-ProteinID:
XP_048015091
LinkDB
All DBs
Position
LG15:complement(28835757..28862821)
Genome browser
AA seq
680 aa
AA seq
DB search
MAASSERSPPPFPDSEEPELLEDSDEGADAFTGTSISEMDSLSPDTTGPPKDIFNEPPED
IFSDPLSEINSEPQKNVKIPSPGSDEAVDLFSDPLDDEADVISSPEVQNPVPDLLKEPVE
APKSDVISEPPSDLSSKPVHKNAIDPPKGAKTAVSAELFDDDDEEDLFNEPLKGVTKKPQ
PSAVSGPPVNVFTEVKSEVKVKPQVKDDPTDLFAEEAVTAPATKPSASSSSRTNGVHSEE
QDIFSEATVELSLDSPRNDRKKKDAVKPSVSAPAASVASSSSKPPSKTLEELEEEESEDK
FDLNISVTNPEKVGDGMNAYMAYKVSTQTSLTMFRSKTFTVRRRFSDFLGLYEKLSEKHS
QNGYIIPPPPEKSILGMTKVKVGKEDPSSAEFVERRRAALERYLQRVVSHPSLLQDPDVR
EFLEKEELPRAVGTQALSGAGFLKMLNKATDAVSKMTIKMNEQDVWFDEKIQDVENEEQQ
LRKLHVMVESLVNHRKELSGNTAVFAKSVAMLGSSEDNTALSRALSQLAEVEDRIEQLHQ
DQAANDFFTFSELLADYIRLLGAVRGCFDQRMKAWQRWQDAENMLQKKREAEAKLLWANK
PDKLQQAKDEITEWEAKVTQFERDFERISATVQKDVIRFDKEKARDFKRQIIKYLESLLH
SQQQLIKYWEAFLPEAKAIA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagctcggagcgcagtcctcctcctttcccggactcagaggagcccgagctg
ctggaggacagtgacgagggcgcggatgcgttcacgggcacgtcaatctctgagatggat
tctctgtcgccggacactaccggacctcctaaagacatcttcaacgagcctccagaagat
atcttcagcgatcctcttagcgaaattaactctgaaccccagaagaacgtcaagatacct
tctcctggtagcgatgaggccgtcgacctgttcagcgacccgctggacgatgaagccgat
gtaattagttcacctgaggtccaaaatcccgtgccagatctcttgaaagagcctgttgaa
gcgccaaagtctgatgtcatcagtgaaccgcctagtgacctcagcagcaagcctgtgcac
aaaaacgccatcgaccctccgaagggcgccaagactgcagtgagcgcggagctgttcgat
gacgacgatgaggaggatctgtttaacgagccgttaaaaggcgtgacgaagaagcctcag
ccctcagcggtgagtggaccacctgtcaatgtcttcacagaggtgaaatcagaagtgaag
gtcaagccacaggttaaagacgaccccacggatctgttcgcagaggaagccgtgacggca
cctgccaccaaaccttccgcgagcagcagctccaggaccaatggggttcactctgaggag
caggatatcttctcagaggctacagtggagctgtctctggacagccctcgtaatgaccgc
aagaagaaggatgccgtgaagccgtcagtatcggctcctgccgcctctgtagccagcagc
tccagcaaacctccgtccaaaaccctggaggagctggaggaagaggaaagtgaggacaag
tttgatctaaacatttccgtgacaaatccagagaaagtcggtgatggtatgaatgcttat
atggcctacaaagtttcaacacagacgtcgttaaccatgttccgtagcaagacgtttact
gtacgcagacgtttcagtgatttcctgggactgtacgaaaagctctcggagaaacactca
cagaatggatacatcattcctccaccaccggagaagagcattctgggtatgacaaaagtc
aaagtggggaaggaggatccatcatcagcagagtttgtggagcggaggagagctgctcta
gagaggtatcttcagagggttgtgagtcacccgtctctcctgcaggaccctgatgtcagg
gagtttttagagaaagaagagttacccagagcagtcggcacacaggctctgagtggagcc
ggcttcctcaaaatgctcaacaaagccacagacgctgtgagcaagatgaccataaagatg
aacgaacaggacgtgtggtttgacgagaagatccaggatgtagaaaatgaagaacagcag
ttgcggaaacttcacgtcatggtggaatcgcttgtcaatcacaggaaagagttgtctggg
aacacagccgtgtttgcgaagagcgtggcgatgttgggcagctcggaggataacacggct
ctgtcgcgagctctgtctcagctggccgaggtggaagatcgaatcgagcagctccatcag
gaccaggccgccaacgacttcttcaccttctcagagctgctggccgattatatacgactg
ctgggagccgtcagggggtgttttgatcagagaatgaaagcgtggcagcgctggcaggac
gctgagaacatgctgcagaaaaaaagagaggccgaggccaaactcctgtgggccaacaaa
cccgacaaactgcagcaggccaaggatgagatcactgagtgggaggcaaaggtcacacag
ttcgagagagacttcgagagaatctcagccaccgtacagaaagacgtcatccgtttcgat
aaagagaaagctcgagattttaagagacaaatcatcaaatatctggagtcacttctgcac
tcacaacaacagctgataaaatactgggaggcgtttttgccggaggcgaaagcgatcgcg
tga
DBGET
integrated database retrieval system
