Megalobrama amblycephala (Wuchang bream): 125248216
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Entry
125248216 CDS
T08212
Symbol
nbeab
Name
(RefSeq) LOW QUALITY PROTEIN: neurobeachin
KO
K24183
neurobeachin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125248216 (nbeab)
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
125248216 (nbeab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
Laminin_G_3
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
125248216
NCBI-ProteinID:
XP_048015902
LinkDB
All DBs
Position
LG16:complement(7251690..7639974)
Genome browser
AA seq
2887 aa
AA seq
DB search
MASVQPVATPGDRTPHPGHRHHGAAAAAAGSGTGDMMMMMSCSGSVVLPAGVINPSVPIR
NIKTKFAVLTGLIQVGEVSNRDIVETVLNLLVGGEFDLEMNFIIQDAEAIICMLELLEHC
EVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIQRLLLKMSSVDDMIADLLVDMLGVLASY
SITVKELKLLFSMLRGEGGLWPRHAVKLLSVLTQMAQRHGPDTFFNFPGRSAAAIALPPI
AKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSKGIGYSAHFVGNCLIVTSLKSK
GKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTNDSYDK
CFLGSSETADANRVFCGQLGAIYVFSEALNPAQIFAIHQLGPGYKSTFKFKSESDIHLAD
HHKQVLYDGKLANSISFTYNAKATDAQLCLESSPRENPSIFVHSPHALMLQDVKAIVTHS
IHSAIHSIGGIQVLFPLFAQLDFHQHNESQVETTVCSTLLAFLMELLKSSVAMQEQMLGG
KGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLTHGAPLLKQLCDHILFNAAIWIHI
PAKVQLSLYTYLSAEFIGTATIYNTIRRVGTVLQIMHILKYYYWAVNPAHTSGITPKGLD
GPRPLQKEITSLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDENLHDVLQLLVA
LMSEHPASMIPAFDQRNGIRVVYKLLASKSESIRVQALKVLAYFLKHLGHKRKVEIMHTN
SLFTLLGERLMLHSNTLSITTYNTLYEILTEQVCTQVVHKPHAEPDSTVKIQNPMILKVV
ATLLKNSTASADLMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSE
EQKITEMVYNIFRILLYHAIKHEWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQ
EEENIKKGKKGLVSTISGLSAQAXPAIKGTLELDPDSQTQTPESEADEPEMTDSGQNLLS
ESKSLEEENPASGVHVEVHDLLVDIKAEKVEATEVKMDDMDLLPVTENGGLVEVDSLLDN
VYSAVVEKLNSSVNSVLVPKASLEDKSSGPLITLADEKDAISSNNTFLFGTMATSSGENL
LPEMGPSEPLPLSGVEPQVHTSTSADHGLLALMTKSSKELDANPTALEDDSFKLQPTLSG
FNVSEGESLSKCPGQIETVAVELEPGVSGVKSTADVTSTTSDTEKSDDGKDKEIKKIQTT
TTTQSLHGRSGSHLDKDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRL
LTDLLFALEADVHIWRSHSTKSIMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILPL
LSAATSPSNTKTEMEGIEATQGMSAETAVIFLTRLMAMVDVLVFASSLNFSEIEAEKNMS
SGGLMRQCLRLVCCVAVRNCLECRQRQRDRSLKSSFSYSKSQEGLQSVSTASKTTIENFP
SNVSPIKDPDRLLQDVDINRLRAAVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDILEP
QRETVRSISQSGRGIRHEINSPTSTEHPSAFSDGRKEALSVLEESRQESSLPHSDSGLGD
DQVSSVMNGADLELAMGGPNGMSGLFCTLSSEVRSQESLTEPSPVELLKPALSISSISQS
NKGINVKEILKSLVAAPVETTESGPDSLPYPDHQAMKREAQAMLPMQFHSFDRSVVVQAK
KPLSGLTVNTVGSSASSSTLTSGSTPNIFAATSATPKSMINTTGATDSSTPSSSSFVNGA
TSKNLPAVQTVAPMPEDTMENMSITTKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQ
ELLIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVR
VANEAEFILNRQRAEDVHKHAEFESNCAQYAADRKEEETMCDHLISAAKHRDHVTANQLK
QKILNILTNKHGAWGTVAQSQLHDFWRLDYWEDDLRRRRRFIRNPFGSTHLDITCKSLED
YGPEEDEALRGRKGFRGQAVVSQNPETELMLEGDDDAVSLLQEKEVDNLAGPVVLSTPAQ
LIAPVTEARGTLSITTTEIYFEVDEDDPSFRRIDGKVLVYSEGLHGKWMFSEIRAVFTRR
FLLQNTALEIFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQL
FKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTIPGN
FRDLSKPIGALNPKRAVFYADRYESWDEETPPCHYTTHYSTAASTLHWLVRIEPFTTFFL
NTNGNKFDHPNRTFSGIARSWRHCQRDTADVKELIPEFYYLPEMFVNSNGYCLGDRDDGV
PVCDVELPAWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAARALNVFHH
LTYEGSVNLDSLASDPPLREATEAQIQSVGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMF
KDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTLPAVVTITCSRLFAVNRWHNTVGLRGAP
GYSLEQAHHLPIEMDSLIANNSGTNKRQITDLVDQSIQINTQCFVVTADNRYILVCGFWD
KSFRVYSSDTGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHI
IGDNPNNSDYPAPRAVLTGHDYEVVCVSVCAELGIVISGAKEGPCLVHTITGDLLRALEG
PDSCVLPRLISVSSEGHCIIYYDRGQFCNFSINGKLLAQMEINDSTRAVLLSSDGQNLVT
GGDNGVVEVWQACDFKQLYVYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH
FEHQNRY
NT seq
8664 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgttcagccggtggccacgccgggcgatagaacacctcatcccggccacagg
catcacggagccgccgccgctgccgcgggctccggtaccggtgacatgatgatgatgatg
tcttgctccggctcggtggtgctaccggccggggtgataaacccatcggttcccatccgg
aatatcaagacgaaattcgcagtgctcaccggtctcattcaagtcggtgaggtcagcaat
agagacatagtggaaacagtgttgaatctgctggttggtggtgagtttgacctagagatg
aacttcatcatccaggatgctgaggccatcatctgcatgttggagctgctggaacactgt
gaagtcacgtgccaggcggaaatctggagcatgttcaccgccatcctgcgcaagagtgtc
cgaaacctgcagaccagcactgaggttggcctcattcaaaggctattgctcaaaatgagc
tccgtggatgacatgatcgcagacttgctggtggatatgctgggagttctggccagctac
agtatcaccgtcaaagaactcaaattgctcttcagcatgctgagaggagaaggagggttg
tggccaagacatgcagtcaaactgctctcagttctcactcaaatggctcagagacacgga
cccgacactttcttcaacttccctggccgaagtgcagccgcaattgcattacctcctatt
gccaaatggccttatcagaacggcttcaccctcaacacctggtttcgcatggatcctttg
aacaacatcaacgtggacaaagacaaaccctacctttactgtttccgcacaagcaaagga
atcggctactcggcacattttgtgggtaactgcttgattgtgacatcattgaagtcgaaa
ggaaagggcttccagcactgcgtgaaatatgactttcagccccgcaagtggtacatgatc
agcatcgttcacatctacaaccgctggaggaacagtgagattcgctgctacgtcaatgga
cagctggtctcctacggtgacatggcttggcacgtcaacaccaacgacagctatgacaaa
tgtttcctcggctcatctgagacggcagacgccaaccgagtgttctgcggacagctcgga
gccatctatgtgttcagtgaagcgctaaaccctgctcagatatttgccatccatcaacta
ggcccaggatacaagagcacctttaaatttaaatcagagagtgatattcatctggctgac
caccataaacaagtgttgtatgatggaaagttagcaaacagcatctccttcacttacaac
gccaaagccacagatgctcagctctgcttggagtcctcgcccagagaaaacccatccata
tttgtgcattcgcctcacgctctaatgcttcaggatgttaaggccatcgttacgcactcc
attcatagtgccattcactccattggtggcatccaggtgctgtttcctctctttgcacag
ctggatttccatcagcacaatgaaagccaggtggaaaccacagtgtgttcaactcttctg
gccttcctgatggagcttctcaagagctcagtggcaatgcaagagcagatgcttggtggg
aagggtttcctggtgattgggtatctcctggaaaagtcatcgcgggtgcacatcaccagg
gccgttctggagcagttcctgtcttttgccaaatacctggacggccttacccacggtgca
cctctcctcaaacaactctgtgaccatatcctgttcaatgcggctatttggatccacata
cctgcaaaggtgcagctctcgctgtacacatacctttcggcggagttcattggcacggca
accatctacaacaccatccgtcgagtggggaccgtgctgcagatcatgcacatactgaag
tactattactgggctgtgaaccctgcccacaccagcggcatcacacccaaaggcctggac
ggtcctcggcccttgcagaaagagataacctccctcagagccttcatgctgctgttcctc
aaacagctcatactgaaggaccgaggtgttaaagaagatgagcttcaaagtattcttaac
tacctgctgaccatgcatgaggatgagaacctccatgatgttcttcagctgcttgtggcc
ctcatgtcagagcaccctgcctccatgattcctgcatttgaccagagaaatggcatccgg
gtggtgtacaaacttctggcttccaagagtgaaagcatccgagttcaggctctaaaagtt
ctggcatattttctcaaacacttaggccacaagaggaaggtggaaattatgcacacaaac
agtctcttcacacttcttggggagcgattgatgttgcactccaacacactgtcgataact
acgtacaacacactatatgagattttgacagagcaggtttgcacacaggtcgtccacaag
cctcatgctgagcccgactctactgtgaagatccagaacccaatgattcttaaggtggtg
gccacactgctgaagaactccacggccagtgcggacctgatggaggtgcggcgtctcttc
ctctctgacatgatcaagctcttcagtaacagccgtgaaaacagacggtgtctgctgcag
tgttccgtttggcaggactggatgttctctctcggctacattaaccctaagaactcagag
gagcagaagatcactgagatggtttacaacatcttccggattcttctctaccacgccatc
aagcatgagtggggcggctggcgtgtgtgggtggacacactctccatagcccactccaaa
gtgacatatgaagctcataaggaatatttagccaaaatgtatgaggaataccagcgacag
gaagaggagaacattaagaaagggaagaaggggcttgtgagcaccatttcagggctttct
gcccaggctnntcctgccatcaaaggcactctagagctggacccagattcccaaacccag
actcctgagagtgaagctgatgaaccagagatgacagattcagggcagaacctcttgtct
gaatctaagagtttggaagaggagaacccagcgtcaggtgtccatgtggaagttcatgac
ctgcttgtagatatcaaagctgagaaggttgaggccaccgaggtgaagatggatgacatg
gaccttctgcctgtcacagaaaatggtggcttagtggaagtggactctctcctggataac
gtctactcggctgtagtggagaagctgaacagcagtgtaaatagtgtgctggtgcccaaa
gccagcctagaagacaaaagctcaggtcctcttatcaccctggctgatgaaaaagatgct
atttccagtaacaacaccttcctctttggcacaatggcgaccagctcgggggaaaacctc
ttgcctgaaatgggtccatctgaacctcttccgctttcaggagtggaacctcaggtccac
accagcactagtgcagaccatgggcttctggctctcatgacgaagagctcaaaagagttg
gatgccaacccaactgctttggaggatgatagctttaagttgcagcctactttgagtggt
ttcaatgtctctgaaggggaaagcctgtctaaatgccctgggcagatagagacggtggca
gtagagctggagccaggggtttctggggtaaagagcactgcagatgttaccagcaccaca
tcagacacagagaaatcagatgatggcaaagataaagagattaagaagattcagactact
actacaacacagagtttgcacggccgttcaggcagtcatctggataaagatctgcgggtg
gatctgggcttcagaggaatgccaatgacagaagagcagcgtcgacagttcagccctggt
ccccgcaccaccatgttccgtatcccagagttcaagtggtccccaatgcaccagcgctta
cttacagatctgctctttgcactagaagcagacgtacacatttggagaagtcactcgacg
aaatccatcatggactttgtcaacagcaacgagaacataatctttgtacacaataccatt
cacctgatctcacagatggtggataacatcatcatcgcctgtggaggaatccttcccctt
ctgtctgccgccacctcgccctctaataccaagactgaaatggaaggaatcgaggcgaca
cagggcatgtctgctgagacggccgtgatctttctgacccggctgatggccatggtcgat
gtgctggtcttcgcaagttcactcaacttcagcgagattgaagccgagaaaaacatgtcc
tcaggtggactgatgcgacagtgcctaagactagtatgttgtgtggccgtgaggaactgt
ttagagtgtcgtcagcgtcagagggacaggagtctgaagtcctctttttcctacagtaag
tctcaggagggcctgcaaagtgtgtccacggccagcaagaccaccatagaaaattttcca
agtaatgtttctccaattaaggacccggaccgacttctgcaagacgtggacatcaaccgt
ctgcgagctgctgtctttcgtgacgttgatgacagtaagcaggcccagttcctggctctc
gctgttgtctattttatctcagtcctcatggtgtccaagtaccgggacatcctggaaccc
cagagggagactgtcaggtctatcagccaatcaggaagaggcattcggcatgagataaat
tcccccaccagcacagaacacccatcagccttctctgatggtcgcaaggaagctctcagt
gtgctggaggagtcacgtcaggagtcatccctccctcactctgactcaggactgggtgac
gatcaggtatctagtgtgatgaacggggccgacctggagctcgccatgggtggtccgaac
ggcatgagcggactgttctgcaccctgtcatcagaggtcaggtcacaggaaagcttgact
gagccatcacccgtggagctcctcaagcccgctttgtccatctccagcatcagccagtcc
aacaaaggcatcaatgtcaaggaaattctgaagagcctggtagctgctcctgtggagacc
acagagagtgggccagacagcctgccttaccctgaccaccaggccatgaagagggaagcc
caagccatgttacccatgcagttccattcctttgacaggagtgtggtggtacaggccaag
aagcctctgtcgggcctgacggtgaacaccgtgggcagttctgcctccagcagtacccta
acctctggtagcaccccgaacatctttgctgctacatcagctacacccaagagcatgatc
aacactacaggagccacagattcttccactccctcttcttccagctttgtgaatggagcc
accagcaagaatctgcctgcagttcagactgtggcccccatgcctgaggacaccatggag
aacatgagtatcaccactaaactggagcgagcactggagaaggtggcgccattgctgagg
gagatctttgtggactttgcacctttcctgtctcgtactctgctgggcagtcacggtcaa
gagttgctcattgaaggtctggtgtgcatgaaatcaagcacctctgtggtggaactagtc
atgttattatgctctcaggagtggcagaactcgatacagaagaacgctggcctggctttc
attgagcttatcaacgagggaagactcctttgtcatgccatgaaggatcatatcgttcga
gtggccaatgaagcagagtttatcctcaacagacagcgagccgaggacgtccacaagcat
gcagagtttgagtctaactgcgcacagtacgcggcagacaggaaagaagaggagacgatg
tgtgatcacctcatcagtgctgccaaacatcgtgatcatgtgacagccaatcagctgaaa
cagaagatcctcaacatcctcaccaataaacacggagcctggggcacagtagcacagagt
cagctgcatgacttctggcgtctggattactgggaggatgacctccggaggaggcggaga
ttcatccgaaacccttttggctccacccacttggatattacgtgcaaatcactggaggac
tacggccctgaggaagatgaggcactgagagggagaaagggcttccgcggccaggcggtg
gtcagccagaaccctgagacagagctgatgctcgagggggacgatgacgctgtcagtcta
ctacaggagaaagaggtggataacctggcaggccctgttgttttgagcaccccggcccag
cttattgccccggtcactgaagctcgtgggactctctccatcactaccacggaaatatat
tttgaagtggacgaagatgacccatccttcagacgcatcgatggcaaagtgctggtctac
tctgaggggcttcacggcaaatggatgttcagcgagatccgagctgtgttcacccgacgt
ttcctgcttcagaacacagcgctggagatcttcatggccaacagaacgtccgtcatgttt
aacttccccgatcaggccacagtgaagaaggtggtctacagtcttcctcgcgtaggcgtc
ggcacaagttacggccttccacaggccaggcggatttctttggccacccctcgtcagctc
ttcaagtcctctaatatgactcagcgctggcaaagacgggagatctcgaactttgaatac
ctgatgtttctcaataccattgcaggaaggacatacaatgatctgaaccagtatcctgtt
ttcccatgggtccttacaaactatgagtcagaagaactggacctgacaattcccggcaac
ttcagggatctttcaaagccaatcggagcgctgaacccaaagcgtgctgtgttctacgcc
gatcgctatgaatcctgggatgaggaaactccaccctgccactacacaactcactattcc
accgcagcctccaccctccactggcttgtccgaatcgagcctttcaccacattcttccta
aacaccaacggcaacaagtttgatcacccaaaccgcactttctccggcatcgcccgctcg
tggaggcactgccagcgtgatactgcagatgtgaaggagttgatccctgagttctactac
ctgcccgagatgtttgtgaacagtaatggctactgtctgggtgacagggatgacggtgtc
cctgtttgtgatgtagaactaccagcttgggcaaagaaaccagaggactttgtcaggatc
aacaggatggctctggaaagcgagtttgtgtcgtgtcagctgcaccagtggattgacctt
atttttggctacaaacaacgtgggcccgaggcggcacgcgccctcaacgtctttcaccac
ctgacctacgagggctccgtcaacctcgacagcctcgccagtgatcccccattgcgcgag
gccaccgaggctcagatccaaagtgttggacagacgccatctcagttgctcatcgagcct
catcctccccgtagctccgccatgcacctgtgtttccttccgcagagtccgctcatgttt
aaggatcagatgcagcaggatgtcatcatggtgctgaagtttccctccaactctcccgtc
actcacgtggccgccaacacactgccccacctgaccctccccgccgtcgtcaccatcacc
tgcagccggctcttcgccgtcaaccgctggcataacacagtgggtcttcgaggagctcca
ggatattcactagaacaggcccatcacctccccattgagatggattcgctgattgcgaac
aactcgggcacaaacaagcgacaaatcactgacctggttgaccagagcattcagatcaac
actcagtgttttgtggtgacggcagataaccgttacatcctggtgtgcggtttctgggac
aagagtttccgcgtttactcatcagacacaggcaagctcactcagatagtgttcggtcac
tgggacgtggtcacatgtctggcacgctcagagtcgtacatcggaggcgattgctacatt
gtgtctggatccagagatgccactctgctgctctggtactggagtgggcgccaccatatc
ataggagacaaccctaacaacagcgattacccagctccccgtgcggttctgaccggtcat
gactatgaggtggtgtgtgtgtcagtgtgtgctgagctggggattgtaatcagtggagca
aaagaggggccgtgtctggtccacaccatcactggggatcttctgagggctctggagggc
cctgatagctgtgtgcttccccgcctgatctcagtgtccagtgagggccactgcatcatc
tactatgacagggggcagttctgcaacttcagcatcaacggcaaactgctggcccagatg
gagatcaacgactccacacgtgccgtcctcctgagcagcgatgggcagaatctagtgact
ggaggagataacggggtggtggaggtgtggcaggcctgtgacttcaagcagctgtacgtc
taccctggctgtgacgcggggatccgagccatggacctgtcacatgatcagaggactctg
atcacgggcatggcgtccggtagcatcgtggctttcaacattgattttaatcgctggcac
tttgagcatcagaacaggtactga
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integrated database retrieval system
