Megalobrama amblycephala (Wuchang bream): 125248510
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Entry
125248510 CDS
T08212
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125248510 (vps53)
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Others
EARP complex
125248510 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
125248510 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
Laminin_II
FBF1
Sec8_N
GrpE
DUF677
NBD94
COG3_N
Motif
Other DBs
NCBI-GeneID:
125248510
NCBI-ProteinID:
XP_048016386
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All DBs
Position
LG16:complement(24489937..24517270)
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AA seq
831 aa
AA seq
DB search
MMEDEELEFVEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNNIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITWDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEETFPAQGSKKSGGPSIVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKLMRTRAREIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLNDGPGQKKTETPLEPTNPFLEDESGEDNISEKDEDLDRPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALSTIFQKYLREYAWKILSGNLPKTSTNSGGLTISSLLKEKEGEVA
KFTMEELCLICSILSTAEYCLATTQQLEEKLKEKVDKSLMERINLSGEMDTFSTVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRKY
FTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTILLDLPSIGSQVVRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRSE
QSTMLELFRQRLPTPPSGPDGGPSLSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggatgaagaattagagtttgtggaagatttggaggcgattttacaccttact
ccagaagtgcagctggccattgagcaggttttccccagccaagaccctttggatcgagct
gacttcaatgctgttgaatacattaataccttgtttccaacagagcagtcattggcgaac
atagacgaagtggtgaataacatacggcttaaaatcagacggttggatgacaacatcagg
acagtggtgaggggacagactaatgtggggcaagatggcagacaggcgttggaggaggcc
cagaaagccatccagcaactctttggcaaaatcaaagacatcaaagacaaagcggagaaa
tcggagcaaatggtgaaagaaatcacatgggacatcaagcagttggaccatgcaaagcgt
cacctgacgacttctataacgaccctcaatcacctgcacatgctggctggtggtgtggac
tctcttgaagctatgactcgaaagaggcagtatggggaggtggccaatctccttcagggt
gtagtcaacgtacttgagcacttccagaagtacatgggcatcccccagatacgccagctc
tcagaaagagttaaagccgcacagagtgagcttggtacacagatactggctgacttcgag
gagacctttcctgctcagggttcaaagaaatctggaggtcctagcattgttctcagagat
gcctgcctggtggccaatgtcctagatcctcggattaagcaggagatcattaaaaagttc
atcaggcagcacctgtcagaatacttagttctcttccaagagaaccaggatgtggcgtgg
cttgacaaaatagaccggcgctatgcatggatcaagcgtcagctcgtggactatgaagag
aagtatggacgaatgttccctgaggagtggtgcatgaccgagcgcatcgctgtagagttc
tgtcatatcaccagaaccgagctagccaagctgatgcgaacccgtgccagggagatcgag
gtcaagcttttgctcttcgctattcagaggaccaccaatttcgagggactgctggctaag
cgcttctcaggctgcactttgaacgacgggcccgggcagaaaaaaactgagacgcctcta
gaaccaacaaacccctttctggaagacgagtcaggagaggacaacatatcagaaaaggat
gaagatttggatagaccaaagaagcccaaggctccagacaaccccttccacggcattgtg
tccaagtgcttcgagcctcatctctacgtttacatcgagtcgcaggataaaaatcttgga
gagctgatcgaccggtttgttgctgatttccgggcacagggtccccctaaatcaggtaca
gatgagggaggcgctgtgctccccagctgtgcagatctcttcgtatactacaagaagtgt
atggtgcaatgctcgcaactgagcaccggagaacccatgattgctctgtccaccatcttc
cagaaatatctgcgcgagtatgcctggaagatcctctctggaaaccttccaaagaccagc
accaatagtggtggtctgaccatcagcagtctactgaaggagaaagagggagaagtggcc
aagttcacaatggaagagctgtgtctcatttgcagcatcctaagcactgctgaatactgc
ctggctaccacacagcagctggaggagaagcttaaggaaaaggtggacaagtccctaatg
gagagaataaacttaagtggggagatggacacctttagcaccgttatttcaaacagtatc
cagctcttggttcaggacctggacgctgcatgtgatccagcccttacagctatgagcaag
atgccgtggcagagtgtggaacatgtgggagaccaaagcccgtatgtgacctctgtaatc
atgcacatcaaacagaatgtgcccatcattagagacaatctggcctccacccggaaatac
ttcacccagttctgcattaagttcaccaactccttcattccaaagttcatcaaccacctg
ttcaggtgtaagccaatcagcatggttggagcagagcaactactcctggacacacactcc
ctcaaaactattcttctagaccttccttccattggctctcaggtggtccgtaaagccccg
gccagctacaccaaaatagtggttaaaggaatgactcgagcggagatgatcctcaaggtg
gtcatggcccctcatgagccgtccgtggtctttgtggacaactacatcaagctccttgct
gacagcaaccctgagactttccagaagatactagatatgaagggtctgaaacggagtgag
cagagcaccatgctggagcttttcagacagaggttgcctactccaccatcaggaccagac
ggtggcccatcattgtccttcagtgcccccacccctgaacaagaatcttcccgtatccgc
aaactggaaaagctcattaaaaagagaattcagtaa
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