KEGG   Megalobrama amblycephala (Wuchang bream): 125248526
Entry
125248526         CDS       T08212                                 
Symbol
col4a3
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04382  Cornified envelope formation
mamb04510  Focal adhesion
mamb04512  ECM-receptor interaction
mamb04518  Integrin signaling
mamb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125248526 (col4a3)
   04518 Integrin signaling
    125248526 (col4a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125248526 (col4a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125248526 (col4a3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    125248526 (col4a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mamb04147]
    125248526 (col4a3)
   00536 Glycosaminoglycan binding proteins [BR:mamb00536]
    125248526 (col4a3)
Exosome [BR:mamb04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   125248526 (col4a3)
Glycosaminoglycan binding proteins [BR:mamb00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   125248526 (col4a3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 125248526
NCBI-ProteinID: XP_048016410
LinkDB
Position
LG16:9758801..9804921
AA seq 1658 aa
MDSCFIFRATLFGMMLLGLLTPAQTKGGCVCIGKSGCDCQGIKGQKGESGSRGMDGVTGN
QGHQGKEGPPGFPGPYGNMGRKGINGPKGSRGSSGSPGFFGSPGLPGIPGKEGPRGLPGL
PGCNGTKGEPGPPGFIGKMGLPGFQGTPGIQGPKGDSYVFLPSGQVKGLCGFPGRAGDKG
QPGMPGFPGPDGPEGPRGAPGINGIPGLQGEKGLEGRSVGRRGPTGQKGERGPPGIPGQK
GVKLFVSGPKEPKGDTGDRGDPGFPGQTGLCGPPGPKGMKGERGEPGAPGKPGKDGLQGE
LGPKGEPGDVGYPGAIGIAGEMGLKGDPGAPGVPGEFILINEMIKGQKGNPGPPGPPGLQ
GSEGFSGFPGSPGPPGIAIPGPKGIQGFPGFRGVKGEKGESAPVITGPPGRDGPPGERGP
PGDPGPPGTPRNCFLSKTGLKGLKGDKGITGPEGLRGDPGTQGDQGDLCRLCAASAADPG
PPGPPGAPGEPGEPGLGGLQGNKGSRGYKGPEGPPGPPGSLGLPGFPGPPGPKGDVGMIS
EIGEKGDKGNTGAVGPLGINGQDGMPGTPGFKGPSGAKGNPSPLGPKGNQGNPGICGEPG
CPGPMGSQGSMGVGQVGAPGEKGSLGVVGRQGNPGEPGEKGSPGPVQMTPGNPGEPGLPG
PSGLPGPPGNEGCAGVQGFPGLCGLKGEKGLSMPGVPGLTGPKGDKGVKGKPGPPGYGRV
GTPGPPGPPGMPGLKGEIAFGSPGPKGRQGLPGDEGGLGLPGISGPPGSSGCPGQRGRDG
PPGDCGVRGLDGLKGEAGVPGCCSPGAKGDEGPSGIRGLDGPTGLQGLKGPQGEIGPCGQ
GLPGLAGVPGMPGKIGQTGLVGIRGPKGFQGRDGPPGFPGTRGDQGSPGMFGPPGVDGNP
GPPGLQGPKGLMGRNGVPGDTGKPGEPGDPGTCGPKGLPSNVMCPGDPGDPGLPGLLGFP
GSKGELGFPGNYGECGKNGVPGGPGPPGPSGDPGQNGFPGNRGLNGNFGDPGVMGFPGVK
GLKGLPGLRGLTGPPGDPGPNGPKGIRGEPSPPGPGLPGLPGEKGEPGCPGVRGEKGDKG
ICGTNGLPGFPGLPGEIGETGVPGGPGPPGAPGDEGLDGFPGPPGCEGPCGPPGVPGSAG
APGPQGHRGEIGRDGIPGSAGDKGDRGYTTNGDPGPPGVNGEKGTKGCPGPPGPCGTPGP
YGPAGDIGPPGKPGEIGPLGYQGPPGICINGPKGEQGPNGLPGPTGLRGPRGPPGDPGPG
LKGDKGCIGPQGPAGPPGCTGDRGFSGEPGRDGNPGFKGLKGNMGPDGFVGPAGQKGHCG
PNGLPGLKGYKGFPGCKGPKGDDVVGEVIYIPGEPGLPGRVGEKGEPGERGPKGLRGPKG
AQGQRGGIGADGGVGPNGGPGPRGNTGPQGQQGPRGLSGEVGPKGSRGPSGGPKNDGFFF
TKHSQTVDLPVCPSGSTHLYFGYSLLFINGNNRGHGQDLGTLGSCLHRFSTMPFLVCNHN
DTCRYASRNDYSYWLSTDTPMPADETLISGDSLAQYISRCAVCEAPANVIAIHSQTSNIP
KCPTGWLPLWQGYSFVMQTGAGAEGSGQPLVSPGSCLEEFRKIPFIECHGRGTCNFYPDS
FSYWLASLDPSRMFSVPEPKTARHKEIISRCQVCMKLS
NT seq 4977 nt   +upstreamnt  +downstreamnt
atggattcttgcttcatatttcgagcgacacttttcggaatgatgttgctgggacttctt
acaccggcacaaactaaaggggggtgtgtttgcattgggaaatcgggatgtgactgtcaa
ggaattaaaggacaaaagggtgaaagcgggtcacgtggtatggatggtgtgactggaaat
caggggcatcaaggaaaggaaggccctcctggatttcctggtccatatggaaatatggga
aggaaaggcatcaatggaccaaaaggttctaggggaagttcggggagccccggattcttt
ggctcaccgggactaccggggatccctgggaaagaggggccgagggggcttcctggtctc
ccaggatgcaatggaacaaagggggagcctggtcccccaggctttatagggaagatggga
cttcctggatttcaggggacaccaggaatccaaggacctaagggagatagctatgtcttc
ctgccctctggacaagtgaaaggactttgtggttttccaggcagagctggagataaaggt
caaccagggatgccagggttcccaggaccagatggaccagaaggtcctagaggtgcacca
ggaataaatggcattcctggattacaaggagagaagggtctcgagggtcgaagcgtggga
agacgtggacccacaggtcaaaagggggagaggggaccacctggtataccaggacagaaa
ggtgtaaagttatttgtatcaggaccaaaggagcccaagggtgacactggggatcgtgga
gaccctggattccctggacagactggtctttgtggtcctcctggtcctaaggggatgaaa
ggggaaagaggagagcctggggctccggggaaacctggaaaggatgggctgcaaggagag
ttaggccctaagggagagcctggagatgttggatatccaggagctattgggatagcaggg
gaaatgggactgaagggtgaccccggtgcccctggtgttcctggagagttcattttaata
aatgagatgatcaaaggtcaaaaaggtaatcccgggccaccaggacctcctggtctacaa
ggtagtgaaggtttcagtggttttcctggatctccaggtcctccagggatcgccatccca
ggacccaaaggaatacaaggtttcccaggatttagaggtgtgaaaggggaaaaaggtgaa
tctgcacctgtcatcacaggacccccaggacgtgatggcccaccaggggaacgaggaccc
cctggtgaccctggacctccaggaactccacgtaactgttttttgtcaaagactggacta
aaagggctcaagggtgacaaaggcataacaggccctgagggtctgcgtggagatcctgga
acacaaggagaccaaggagacctttgcagactgtgtgctgcttctgctgctgaccctgga
cctccaggaccacctggagctccaggcgaacccggagagccaggtcttggaggacttcaa
ggcaataaaggatcccgaggctacaaaggtccagagggtccaccaggtcctccgggttcc
ttaggtcttcctggatttccagggcctccagggcccaaaggagatgtagggatgatatct
gagattggggagaaaggagataaaggaaacacaggtgcagtaggaccattggggataaat
gggcaagatggtatgccgggcacccctggcttcaaaggaccatcaggagcaaaaggaaac
ccaagtcctctagggcctaagggcaatcaaggaaatccagggatttgtggggaacctggc
tgcccaggtccaatgggcagccaagggtcaatgggtgttggacaagtaggggcacctgga
gagaaaggaagtttgggagttgtgggccggcaaggaaatcctggagaaccaggtgagaaa
ggatccccaggaccagtacaaatgacacctggaaacccgggtgagcctggattgcctggt
ccttctggtctaccaggacctccaggtaatgaaggttgtgctggggttcaaggattcccg
ggattgtgtgggttaaaaggagagaaaggactgtcaatgccaggagttcctggacttact
ggtcccaaaggtgataagggtgtgaaaggaaagccaggtccacctggttatggaagggta
ggcacccctggccctccaggaccaccgggaatgccaggcctaaagggtgaaatagcattt
ggctccccagggcccaagggtcggcaaggcctgccaggagatgaagggggccttgggcta
ccaggaatctctggcccccctggatcatcaggatgtccaggtcaaaggggaagggatgga
ccaccaggagactgtggtgtacggggtcttgatggtttgaaaggagaggccggtgttcca
ggatgctgttcgccaggagctaaaggtgacgaaggaccctcagggatcagaggactagat
ggacccactgggctgcaagggctgaaggggccacagggtgaaattggaccatgtggacag
ggtttacctggtttagcaggtgtgcctgggatgcctgggaaaattggacagactggtttg
gttggtatccggggaccaaaaggtttccaaggtcgggatggtcctccaggctttccaggt
acacggggcgatcaggggagtcctggaatgtttggtccacctggagtagatggaaatcct
ggaccaccagggctccagggaccaaaaggtttaatgggtaggaatggagtgcctggtgac
acaggaaaacccggggaaccaggagatcctgggacctgtggtccaaagggactgccatca
aatgttatgtgtccaggggatcccggtgaccctggcctaccaggtcttcttggtttccct
ggctctaaaggggaattaggattcccaggcaattatggagaatgtgggaagaatggagtt
ccaggaggtcctggtccaccaggcccttctggtgaccctggccagaatggttttccagga
aatcggggtcttaatggaaactttggggatccaggagttatggggtttccaggagtgaaa
ggcctcaaaggtttacctggtcttcgtgggttgactgggcctcctggtgacccagggcca
aatggaccaaaagggatcagaggtgaacccagccctcctgggccaggacttccaggacta
cctggtgagaagggtgagccaggctgtccaggggttagaggggaaaaaggtgacaagggt
atatgtgggacaaatgggctcccaggttttccagggcttcctggggaaattggcgaaact
ggagttccaggaggtccaggacctccaggagctcctggtgatgagggtttagatgggttt
ccaggtccacctggatgtgaagggccctgtggtccaccaggtgttcctggttctgctgga
gctcccggtccacaaggacatcggggagaaataggcagagatggcattccaggatcagct
ggagataaaggagatagagggtacactacaaatggggatcctggcccacctggtgtcaac
ggagagaaaggtactaaaggctgtcctggacccccagggccatgcgggacaccaggtccc
tacggtccagctggagatattggtccccccggaaaacccggagaaatcgggccacttggg
taccaaggtcctcctggtatctgtatcaatggcccaaaaggggagcaaggacctaatgga
ctgcctggcccaacaggtctcagaggaccacgtgggcctcctggcgacccaggtccaggc
ctgaagggagataaaggctgcatcgggccccaggggcctgcggggccacctggttgtact
ggtgatcggggtttttctggtgaaccagggagagatggaaatcctggattcaagggtctg
aaaggaaatatggggccagacggttttgttggaccagctggccaaaaaggacattgtggt
ccaaatgggcttcctggattaaaaggttataaaggatttcccggatgtaaagggccaaaa
ggtgatgatgttgtcggtgaggtcatctatatccccggtgaacctggtttgcctggaaga
gttggagagaaaggagaaccaggagaacgtggacctaaaggattacgaggtccaaaagga
gcacaaggtcagaggggaggtataggtgcagatggaggtgttggaccaaatgggggccct
ggaccgagaggtaacactggcccacaaggacaacaaggtcctcgtggtttgtcaggcgaa
gtgggtcccaagggctcacggggcccatctgggggaccgaaaaatgatggattctttttt
accaagcatagccagacagtagatctaccagtctgtcctagtgggtcaacacatctgtac
tttggatattcacttctcttcatcaacggcaataaccgcgggcatggacaagacctagga
actctgggaagctgtttgcataggttctccaccatgcctttcctggtctgtaatcataac
gacacttgtcgctacgcctctcgaaatgattactcctattggctgtctactgacacgccg
atgcccgccgacgagacattaatttctggtgattcactggcacagtatatcagcaggtgt
gctgtgtgtgaggcaccagctaatgtaatagcaattcacagccagaccagtaatatccca
aaatgtcctacaggatggcttccactatggcaaggttactcctttgtaatgcaaacggga
gcaggtgcagaaggttccggacagccgctggtctcacctggatcctgtctggaagaattc
cggaagattccattcatagagtgtcatggtcgcggcacctgtaacttctatcccgattcc
ttcagctactggcttgcatcacttgaccctagcagaatgttcagtgtgccagagcccaag
acagcaagacacaaagagattatcagccgctgtcaggtctgtatgaagctgtcttaa

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