Megalobrama amblycephala (Wuchang bream): 125248554
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Entry
125248554 CDS
T08212
Symbol
cldnf
Name
(RefSeq) claudin f
KO
K06087
claudin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03272
Virion - Hepatitis viruses
mamb04382
Cornified envelope formation
mamb04514
Cell adhesion molecules
mamb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125248554 (cldnf)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125248554 (cldnf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125248554 (cldnf)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125248554 (cldnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mamb03037
]
125248554 (cldnf)
04147 Exosome [BR:
mamb04147
]
125248554 (cldnf)
04515 Cell adhesion molecules [BR:
mamb04515
]
125248554 (cldnf)
Cilium and associated proteins [BR:
mamb03037
]
Other cilia and associated proteins
Stereociliary proteins
125248554 (cldnf)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
125248554 (cldnf)
Exosomal proteins of colorectal cancer cells
125248554 (cldnf)
Cell adhesion molecules [BR:
mamb04515
]
Immunoglobulin superfamily
L1 family
125248554 (cldnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
MFS_MOT1
Motif
Other DBs
NCBI-GeneID:
125248554
NCBI-ProteinID:
XP_048016458
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All DBs
Position
LG16:complement(21314044..21316972)
Genome browser
AA seq
415 aa
AA seq
DB search
MVSQGLQIMGMATAMLGWLGVIIVCALPQWRVSAFIGANIVTAQIIWEGMWMNCVVQSTG
QMQCKVYDSMLALSSDLQAGRAMIIISILTGLCGIVISMAGGKCTNCIEDPRSKAKACII
AGILFIVSGLLCLIPVSWSANTIIQSFYNPLMVEAQRRELADFDCANIMGRIAKEVSGQT
LCFIGFVGICVCCGIPMWRVTSYIGANIVTGQIVWDGLWMNCVMQSTGQMQCKVQDSIMR
LTQDLQAARALTIIAIVIGCIGMLLTFVGGQCSSCLKKESSMAKVLILGGILCIIAGVAC
LIPVCWSAAVTISDFQNVLTIETQKREIGASIYIGWGASAFLLFGGIILCTSCPPSEDMY
PNYPGMYPYQGPMYGPPGAYMPAKTYAPSVAYAGSYLPNKPYPAPAYSVVPGQYL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggtctcccaaggactccagattatgggcatggccacagccatgctgggttggctgggg
gtcattatcgtgtgtgctttgccccagtggagggtgtctgcattcattggggccaacatt
gtcacagcacagatcatctgggagggcatgtggatgaactgtgtggtacagagcactgga
caaatgcagtgtaaagtctatgactccatgctggcgctcagttctgaccttcaagcaggc
cgggccatgatcatcatctccattttgactggactctgtggaatcgtaatttctatggct
ggtgggaagtgcaccaactgtattgaggacccaaggtctaaagcaaaggcatgcatcatt
gcagggattctcttcattgtttctggacttctttgtctgatcccagtgtcatggtcagca
aatacgatcatacagagcttctataatccattgatggtggaggcccagcggagggagttg
gctgattttgattgtgccaacatcatgggaaggattgctaaagaggtttctggccagacc
ctgtgcttcattggttttgttggtatatgtgtctgttgtggcattcccatgtggcgtgtc
acttcgtacattggtgccaacattgtcacgggccagattgtctgggacggcttgtggatg
aactgtgtaatgcagagcacaggacagatgcagtgtaaagtacaagactcaataatgcga
ctgacccaggacttgcaagcggcacgtgcgttgaccatcattgcaatagtgatcggctgc
attggaatgctactgacgtttgtgggtggccagtgcagtagctgtctgaagaaagagtcc
tccatggccaaagtgctgatcctgggtggcatcctctgcattatagctggagttgcctgt
cttattccggtctgctggtccgcggctgtcacgatctcagatttccagaatgttctcaca
attgagacacaaaagagggagattggtgcatccatatacataggctggggcgcctcagcg
tttcttctgtttggagggatcattctgtgtacttcctgtccaccgagtgaagatatgtat
ccaaattacccaggcatgtacccctaccaaggacctatgtatgggcctcctggagcttat
atgcctgccaaaacatatgcacctagtgtagcatatgctggaagttaccttcctaacaaa
ccttatccagccccagcttactcagttgttccgggacaatatctttag
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