Megalobrama amblycephala (Wuchang bream): 125248788
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Entry
125248788 CDS
T08212
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04137
Mitophagy - animal
mamb04140
Autophagy - animal
mamb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125248788 (hif1al)
04137 Mitophagy - animal
125248788 (hif1al)
04148 Efferocytosis
125248788 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125248788 (hif1al)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125248788 (hif1al)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
TLP-20
FAM176
Motif
Other DBs
NCBI-GeneID:
125248788
NCBI-ProteinID:
XP_048016862
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Position
LG16:complement(24775079..24790528)
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AA seq
643 aa
AA seq
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MVNSVIKRPSLEQRKVRSRDAARCRRSQETEVFYELAHSLPLPRRITSHLDKAAIMRVTL
SYLRMNRLIQSVGPTKTKTEETENPTDGFYQQALAGFILVMTEEGDMIFLSESVSKYIGI
TQLELLGQSVYEFVHPCDQEELRDILTTRPGISKKKTEKLAEHNFFLRMKSTLTHTGRTV
NIKSANWKVLHCTGHMQTFSGDDESSLPAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRHS
MDLTFTQCDGRVTELVGYQPDDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRF
LAKNGGFIWTETQATVLYNSRTSQPEAVVCLNFILSGVEEADVVFSLEQTCQKPKPKAEK
LSVLEKVEEEEEEEEEEEEEEDSDMDESSTAKLFLQMKENPEELMQLAPHSGDAIISLTE
GVELSFCRPSSPNSVPECPQDLCTPELRQLLSPIFDRPTKSPPAASPAEELPMEMEGVEK
FFALKPEESVTLKGQSEAMDEIDLDMLAPYISMDDDFQLTFLPQSEMAASSEMLTNSSRK
RCLEDEEEDDIPVLAAKWERKQMSSSIEEQLLLSHTLLNGLSDDASEEFEPPPQKRCQLL
TDRDPLLGGAQALCDTAALMKDTFLSRPPDLMRPVAETMSSLT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcagtgattaaaaggcccagtttggaacagcggaaggtgcgttctcgtgac
gcggcacgctgtaggaggagtcaggagactgaggtgttttacgagctggcgcactcgcta
ccacttccacgacgcatcacctcccacctggacaaagctgccatcatgagggtgacgctc
agctatctgcgcatgaaccgcttgatccaatccgtgggtccaaccaaaacaaagactgag
gaaacggagaatcccactgatggcttttatcagcaggcactggctggctttattctggtg
atgaccgaggaaggggacatgattttcctctcagagagtgtcagcaaatacattggcata
acacagctggagctgcttggacagagtgtgtatgagtttgttcatccctgtgaccaagaa
gaattgcgagacatcctcaccacaagaccaggtatttcaaagaaaaagaccgagaagttg
gcagaacataattttttccttcggatgaagagcacactcacccacacaggaagaacagtt
aatatcaagtctgcaaactggaaggtccttcattgcacaggacacatgcagacattcagc
ggtgatgacgagagctcgctccctgctggcagcttcctgacattgctgtgtgagcccatt
cctcacccctccagcgttgaattcccacttgacagcagcactttcctcacacgccatagc
atggacctgactttcacacaatgcgacggacgagtcactgagcttgttggataccaacct
gatgatctgattggccggtctgcctatgagttttatcacgcccttgattttgatcatgtg
accaggagtttacacatcttgttctccaagggccaggtgtgcaccagccattaccgcttc
ctggctaagaatggaggatttatctggactgagactcaagccactgtcctctacaacagc
aggacttctcaacccgaggctgtggtctgcctcaactttatcctcagtggcgtggaagag
gcagatgttgtgttctcgttggaacagacctgtcagaaaccaaaacccaaagcagaaaag
ctgagtgtgctggagaaggtggaggaggaggaggaggaggaggaggaagaagaagaagaa
gaggactcggacatggatgagagcagcactgcgaagctcttcctccagatgaaggagaac
ccagaggagttaatgcagctggcacctcactctggagatgctatcatttccctaacagag
ggtgtggagttgtccttctgtcgtccgtctagtcccaacagtgtcccagaatgccctcag
gacctctgtacgcctgaactccgccagctcctttctccaatattcgacagacccaccaaa
tctccacctgctgcgagccctgctgaagagctgcccatggagatggaaggggtagagaag
ttcttcgccctcaaacctgaagagagtgtaactctgaaaggacaatcagaggctatggat
gagattgatttggacatgctagctccatatatctccatggatgatgacttccagttgacc
ttcctgccccagagtgaaatggctgcatcttcagaaatgttaaccaactcttcaaggaaa
cgatgtttagaagatgaggaggaagatgacattcctgttttggctgccaaatgggagagg
aaacagatgagcagctccatagaggaacagcttctgctcagccacacattactgaatggc
ttgtccgacgatgcttcagaagaatttgaaccaccacctcaaaagcgatgtcagcttttg
accgacagggacccgttactgggcggagcgcaggcgttatgtgatacagcagctctcatg
aaggacaccttcctatcacgcccacctgacttaatgcgacctgttgctgaaaccatgtcg
tcccttacttga
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