Megalobrama amblycephala (Wuchang bream): 125248850
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Entry
125248850 CDS
T08212
Symbol
robo1
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125248850 (robo1)
Cell adhesion molecules [BR:
mamb04515
]
Immunoglobulin superfamily
ROBO family
125248850 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Ig_4
Motif
Other DBs
NCBI-GeneID:
125248850
NCBI-ProteinID:
XP_048016940
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All DBs
Position
LG16:complement(19431081..19796868)
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AA seq
1689 aa
AA seq
DB search
MQVTWLGTTVLIIFTLLQFVQSEHSEGPLVPDTGTQEGTSNRVTEAPTAEHDDDNSLGYT
GSRLRQEDSAPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRS
HRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPV
DVMVAAGEPAVMECQPPRGHPEPTISWKKDGVTIDDRDERITIRGGKLMITNTRKTDAGK
YVCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLVDQSVEFRCEAQGDPVPTIRWRK
EDGELPKGRHEIWEDHTLKLKRLTSGDAGTYTCQAENMMGKTEASATLTVHVVSVPPVFV
VRPRNQVVGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLT
ITAVERSDGGYYSCQALNIAGSVITKALLEVTDVISDRPPPIVRQGPTNQTVAVDGTVVL
GCQATGTPTPTILWRKDGVLVSTHDSRLKQLDTGALQIRYAKLGDTGMYTCTASTPSGEA
SWKAYLEVQEFGAPVQPGRPTDPNLIPSAPSKPEVTDVSRTSVSLSWKPNLNAGATPTSY
VIEAFSHAAGSSWQTLADHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPISDAVKT
QDIPPTSQGVDHGQIQRELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPS
PEGAQQRVEWAMFEVRTPGEHSAVVPQLKKGVTYEFKVRPFFNEFQGTDSDIKVGKTLEE
APSAAPRGVTVTGSGDNGTAILVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGS
TYSVLIPGLVAGITYKVEVAASTGAGPGVKSEATSFQLDSSGRVLPPPLDDENTISQQIS
DVVRQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQR
GGEAVSSAGRPGLLNIGEPATQPWLADTWPNSCSNHNDCTINCCTGSNGNSDSNLATYSR
PADCIANYSNQMDNKASNLLAPDTGLYSDVDLSNKINEMKTFNSPNLKDGRFVGPXGQPT
PYATTQLIQSSLANNNMNSSSGGSGGGSADLNEKQSWKSSQGTPQKQADINTPLQYNVME
QNKLNKDHYRGEGPVSVTIPYNQAQDALTGGTYSSSDRGSSTSGSQGQKKGGRTTKQAKQ
NTMNWTELLPPPPVNPPPCQEYTLSMDDSYDTDMQCPLPPSRMYLQPDELEEEEEEVELE
RGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMHPMLQDNSDLHERRRLLVSPPPPPR
PLSPPHTYGYISSPLGLDTDGLEEEEDEEEGDETDAEVARVHQHHTHPHQQHLPQQRALL
RGLEQTPASSTCDLESSVTGSMINGWGSASEEDNASSGRSSAVSSSDGSFFTDADFAQAV
AAAAEYAGLRVAKHPGKGHHQLPVSGAARKYQNLPAGHRPGSPVSTDSNISAAPGQRRPL
KRQKQHPAAQTGYQRREAYTEDLPPPPIPPPAMLKSPTHPAKTIPEGPRGAMSPRSSSAD
GKDRRTGSGGPRPRDGSDTRTSSSERREGQDIQRGQRTGKSSKQDAAPKSRQHPGSEDIL
PYSRPSFPAVHSPRGERDPSSSSSLSSRGSGGRRRGEGAPGARRNPADVGLNTIGAFQTG
GEELEMVES
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcacatggttaggcaccacagtcctcatcattttcactttgctgcagtttgta
cagtcagagcattcggagggtcctttggttccagacacggggactcaggaggggactagc
aatagggtcacagaggcccccactgcagaacatgatgatgacaactctctgggatacaca
ggatcccgtctgcgtcaggaagactccgcaccccgcattgtggaacacccctccgatctg
atcgtatccaaaggtgagcccgccaccctaaactgcaaggctgaagggcggcccaccccc
accgtggagtggtacaaggatggagagcgtgtggaaacggaccgggacaaccctcgatcc
caccgtatgctcctgccgagcggttctctcttctttctgcgtatcgtacacggccggcgc
agcaaacctgacgaaggctcctacgtttgtgtggcccgtaactacctgggagaagcggtt
agccacaacgcctcgctggaagtagcaattcttcgggatgatttcagacagaaccctgtg
gacgtgatggtggcagcgggcgagccagcggtcatggagtgccagccgccccgcggacac
cctgaacccaccatctcctggaagaaagatggagtcaccatcgatgacagagatgagaga
ataacgatacgaggaggaaaactgatgattaccaacacccgcaaaacggatgcagggaag
tacgtgtgcgtgggaaccaacatgatgggggaacgagagagtgagatcgcagagttgacc
gttctcgagaggcccagcttcttgcgaaagccaagcagtcagtctgttctggtggaccag
agtgttgagttcaggtgtgaagctcaaggagaccccgttcccaccatccgctggaggaaa
gaggatggagagctacccaagggaaggcatgagatctgggaggaccacactctcaaactg
aagagactgacttcaggagacgccggtacttacacctgtcaggcggagaacatgatgggg
aagacggaggccagcgccaccctcaccgtccacgttgtgtctgttcctccggtgtttgtg
gtgcgacccaggaatcaagtagtcgggatgggccgcaccgtgacctttcagtgcgaagcc
acaggaagtcctcagcctgccatattttggcagaaagaaggcagtcagaacctcctgttc
tcctctcaacctcctcctccctccagtcgattctctgtctctcagacgggcgatctgacc
atcacagcggtggagcgttcggacggaggctactacagctgtcaggctctgaacatcgct
ggcagtgtgatcaccaaagccctgctggaggttacagacgtgatctctgacagacctcca
cccatcgtccgccagggtcccaccaaccaaaccgtggctgtggatgggacggtggtcctg
ggatgccaagccaccggcacgccgactcccaccatcctgtggaggaaagacggggtcctg
gtgtccacccatgattctcgactcaaacagctcgacacgggagccctgcagatccgttac
gctaagctgggagacactggcatgtacacctgtaccgcgtccacccccagcggagaggcg
tcgtggaaggcttacctggaggtgcaagagtttggcgctcctgttcagcctggccgaccc
acagatccaaacctcatccccagcgctccatccaaaccagaggtcacagacgtcagccgc
acctcggtctctctgtcctggaagcccaacctgaacgctggagccacgcccacatcttat
gtgatagaggccttcagccacgcggcaggcagcagctggcagacgctcgcggatcacgtg
aagacggagagcttcgttctaaagggtctgaagcccagcgccgtctacctgttcctggtg
agagcggccaatgcgtacggcctgagtgaccccagccccatcagcgacgctgtcaaaaca
caagacatcccaccaaccagtcagggagtggaccatggccagatccagagggaactagga
gatgttgtcattcacctccacaatcccacaattctctcatcgtcctccgtcagagtccag
tggactgtggagcagcagtctcagtacattcagggctataaggtgatgtaccggccgtcc
cctgaaggcgctcagcagcgtgtggaatgggccatgtttgaggttcgaaccccgggggag
cacagcgcagtcgtcccccagctcaagaagggcgtgacctatgagttcaaagtccgacct
ttcttcaacgaattccaaggcaccgacagcgacatcaaagtgggcaagaccctcgaggaa
gcgcccagtgccgctcccaggggggtcaccgtaacaggaagcggagacaacggcacagcg
atcctggtatcctggcaaccgcccccagaggaggagcagaacggcgtggtgcaggagtat
aagatctggtgtcttggtaacgaaagccgataccacattaaccgcactgtggatggttct
acatactcggttctgattcccggactggtcgcagggatcacgtacaaggttgaggtggca
gccagcaccggggccggtcccggggtgaagagcgaggctacgtccttccagctagactcg
tcaggtcgtgttcttccgccgcctctggacgatgagaatacgatttctcagcaaatctcg
gacgtggtccgtcagccggccttcatcgcaggcatcggtgcagcctgctggatcatcctc
atggtcttcagcatctggctgtaccgccaccgtaagaagagaaacggcctcagcagcagc
tacgccggcatccgcaaagtgccctccttcaccttcacccccacagtggcctatcagaga
ggaggagaggccgtcagcagtgcaggaaggccaggtttattgaatataggtgaaccagca
acccagccctggcttgcggacacctggcccaacagctgctccaatcacaacgattgcacc
atcaactgctgcaccgggagcaacggaaacagcgacagcaacctggctacctacagccgc
ccagccgactgcattgccaactatagcaaccaaatggacaacaaggccagcaacctgctg
gctccagacacaggcctttacagcgacgtggacctctccaacaagatcaatgagatgaag
accttcaacagccccaacctgaaggatggccgtttcgtggggcccnggggtcagcccaca
ccctatgccaccacccagctcatccagtccagcctggccaacaacaacatgaacagcagt
agtggcggaagtggaggaggaagcgcagaccttaacgagaaacagagctggaagagcagc
cagggaacacctcagaaacaggccgacatcaacacaccactgcagtataacgtcatggag
cagaacaaactgaacaaggaccactaccgaggtgagggtccggtctcagtcaccatcccc
tataaccaggcccaggacgccctcacaggaggaacctacagcagctcggacagggggagc
agcacctctggaagtcaagggcagaaaaaaggtggacgaacaactaaacaggccaaacag
aacacaatgaattggaccgaactgttgccacctcctccggttaatccaccaccatgtcag
gaatacaccctctctatggacgacagttatgacacagacatgcagtgccctttaccacca
tctcggatgtatctgcaacctgatgagctagaagaggaggaggaagaggtggagctggag
cgcggacctacgcctcctgtacgaggagcggcttcctcacctgccgccgtgtcctacagt
caccagtccaccgcgaccctcaccccgtcccctcaggaggagatgcatcccatgttgcag
gataactctgacctacatgagcgcaggcgactcttggtgagcccaccccctccaccacgc
cccctctccccgccgcacacgtacggctacatctccagccccctgggtctggacacggat
ggcctggaggaagaagaggacgaggaagagggtgacgagacagatgcagaggtggctcga
gtccaccagcaccacacccaccctcaccagcagcacttgccccagcagagggctctcctg
cggggcttggaacagaccccggcctccagcacctgtgacctggagagctccgtcaccgga
tctatgataaacggctggggctcggcttcagaggaagacaacgcctcgtcgggtcgttcc
agcgccgtcagctcatcagacggatctttctttacagatgccgattttgctcaggccgtg
gcagccgcggccgaatatgctggtctacgagtggcaaagcatcctgggaaaggccaccat
cagcttccagtgtctggagcagcacggaaataccaaaacctccctgcgggccatcgtcca
ggcagcccagtgtccacagacagtaacattagcgcagccccgggtcagaggaggccccta
aagaggcaaaaacaacatccagctgctcagacaggctaccagcggcgagaggcctataca
gaggatcttccccctcctccgattcctcccccagccatgctgaagtctccaacacacccg
gccaaaactatcccggagggcccacggggggctatgtcacccagatccagttctgctgat
ggcaaggacaggcgaacgggttcgggcggaccaaggccccgggatggctcggacacccgg
accagctcttcagaacggcgggagggccaagatatacagaggggtcaaagaaccgggaaa
agcagcaaacaagatgcagccccaaagagccgccagcacccaggctcagaggacatccta
ccttatagtcgcccatctttcccagccgtccacagtcctcgtggagagagggaccccagc
tcctccagttcactgtcctctcgggggtccggtggacggcggagaggcgagggggctcca
ggggcccgcagaaaccctgcagatgttgggctaaacaccataggagccttccagacagga
ggggaggagcttgagatggtggagagctga
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integrated database retrieval system
