Megalobrama amblycephala (Wuchang bream): 125249078
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Entry
125249078 CDS
T08212
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125249078
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125249078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
DUF6244
Motif
Other DBs
NCBI-GeneID:
125249078
NCBI-ProteinID:
XP_048017227
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All DBs
Position
LG16:43952100..43970387
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AA seq
675 aa
AA seq
DB search
MMFRDQVGILTDWFKSWNECEQTVALLSLLKRVSRTQARFLHICLDHWLADCTEIHILEA
EANNAAIVSQWQQEPKEKAVSLLLSHLPLLQPRNSEAKCEYMNLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRNSLAMWLNHLEEHLSSRPPPPGPYHHARQGSDEWPCSAES
LEPSYSWQEKLPSTCSSPAGQNGHMPFPGTGGVTSPVNSGGNSGLPGQLQPSPLKPSMSL
TPANQPACSSDWLNQEEGVGCQGVAGAEHAPLSPQSSVASSGSEQTEEQSNTRNTFQEDG
SGMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEQHLESQNVTKGARHKIALSIQKLRE
RQSLLKSLEKDILEGGNVRNALQELQQIIITPIKVYTPPTAAQKEVEPGVTPVDKAANPG
EEKDTEGFQTHNPPACDGESSSAPISDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQ
LIEKCLTHEAFTETQKKRLLSWKQQVLKLLRLFPRKTMMDSGVYRRGWPAYGSNSLPTAG
SVSAGLGRRGQRPFQMPPRGAPPPGRMGLMTAGGLTGASPRHSLANPAAVSAQGRQNLWF
GNPGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLLFQQQECQVPGTDLEINPTLESLCLSM
TEHALGDGMDRTSTI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaagtggggattttgacagactggtttaagagctggaacgagtgt
gaacagacggtggcgctgttgtcattgttgaagcgtgtttctcggacacaggcccggttt
ctgcacatctgtctggaccactggctggccgactgcacagagatacacatacttgaggca
gaagccaacaatgcagccatcgtcagtcaatggcagcaggagccgaaggagaaagccgtg
tctctcctgctatcccatctccccctgctgcagccacggaacagcgaagccaagtgtgaa
tacatgaacctcctgcagaaggtcttgagccacactatcgagagcagcctgttcgtggag
gagagccggcagctgctttcctacgccctcattcaccccgccaccaccctcgatgaccgc
aactctctggccatgtggctcaatcacctggaggaacacctgtcgtcccggccgcctccg
cccggaccgtaccatcacgcccggcaggggtcagacgagtggccctgttcggccgagtcg
ctggagccgtcgtactcctggcaagagaagctgccatccacatgcagctcgccggccgga
cagaacggacacatgcctttccccggcacgggtggcgtgacctcgcctgtcaacagcggc
ggcaactcgggactgcccggtcagttgcagcccagcccactgaagccctcgatgtcactc
acacctgccaatcagccagcctgcagctctgactggctgaaccaggaggagggtgttgga
tgtcagggcgtggccggagcagaacacgcccccctgtcgccccagagcagcgttgcatcg
tcaggcagcgaacagacggaggaacagagcaacacacgcaacacgtttcaggaggatggg
agtggaatgaaagacgtcccagcctggctgaagagtcttcgtctgcataaatacgcatcg
ctattttctcagatgacgtatgaagagatgatgattctcacagagcaacatctggagtcg
cagaacgtgacaaagggagctcgacataagatcgctctgagcatacagaaacttcgagaa
cgacagagcctcctgaaatctcttgaaaaggatattctggaaggcgggaacgttcggaat
gctttgcaagagcttcagcagatcatcatcacgccaatcaaagtttataccccgcccact
gctgcccagaaggaggtggagcctggagttacacctgtcgataaagcagccaatcccggc
gaagagaaggacaccgagggcttccagacccacaatcctccagcgtgtgatggagagtcc
tcatcggcacccatctctgacggagatatcgcgggacagttcacgcgtgtgatggggaaa
gtttgtacgcagctgttggtgtccagaccggacgaggagaacatcagctgttacctgcag
ctcattgagaaatgtcttacgcacgaggcgttcacagagacgcagaagaagcgactgtta
tcgtggaaacagcaggtgctgaagttgctccgcctcttcccgcggaaaaccatgatggac
agcggcgtgtaccggagagggtggccggcgtacggatccaactctctgcccacagctgga
tctgtgagcgcaggtttgggcagacgggggcagaggcccttccagatgcccccgcgagga
gctccgccacccggccgcatggggctgatgactgccggcggtctgaccggagcgtcgccc
cgacactcgctcgccaaccccgcggccgtcagcgcacagggtcgacagaacctgtggttc
gggaatcctggaggcagtaacagcatgccgagccagagcagaagttctgtgcagagaact
cattctcttcctgttcacacgtctccacagaccatgcttctgttccaacaacaagaatgc
caagttccggggacagatctggagattaaccccacgctggagtctctgtgcctcagcatg
acagagcatgccttaggagacggaatggacagaacgtcgacgatatga
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