Megalobrama amblycephala (Wuchang bream): 125249098
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Entry
125249098 CDS
T08212
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125249098 (npas1)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125249098 (npas1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
125249098
NCBI-ProteinID:
XP_048017254
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Position
LG16:complement(34741260..34827347)
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AA seq
769 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLLEGENNCNKVRRTSHSLV
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCQTSHESASSSASASSLAGTPEPAPSSPCSPVRELSERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSSRPLHRPMGLVALAHTLPPSTL
NEVRMESNMFVFRVNMDLQITYCENRISEYMDLSPAEVVGQTCYHFIHAEDLDTVRQSHD
DLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVNYVLSRPELPDMPL
DLLQLPESLRAERLQASSSPRDTSPKAQGSTATQPLKGRSEKDHKGKEPFSHTAASQSES
TRKRSHQSDAESGPPEARRRIEVFRQRDDSPCTSSDQASDSEVEEDDERESEWDHNPTSK
RVKSEEGALKLGNGANGAGKIHNGRAVIQHLKSVVTSSGSNIKTEQEVIGTVGVGSGRRW
SQPQPSSVGTNGSSPPSQPPNSTPTEAPPKGLFNPPSPTLSPPISASSLPRDDRSIHGGR
APDFELLQRLTASGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPPEMPTAHSDGHRSDHL
AKTPAFFPHLQRIASLPPFSGFSPAEPTFPPTLPFCMNGLRGAAGTDED
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagcgaggggaagtgtgtgagtgtggagtgggacttctta
caggggctcctcgccaaaccacccaccttaccctgcttgcagaacttgaggaaggagaag
tcgcgcaatgcagctcgttctcggcggggcaaagagaactttgagttcttcgagttggca
aagatgcttcccctccccggggcaattaccagccagctggacaaggcctccatcatccgc
ctcaccatcagttacctgcacatgagacactttgccagccagggagacccaccctggagc
cctctactggagggagagaacaactgcaacaaggtgcgaagaacaagtcattcgttggtc
actgacatatttgaacagcacctgggagctcatctgctgcagtctctggatggattcgtg
ttcgtggtcagtcaagaaggcagatttctttatatctcagagactgtgtccatctacctt
ggcctttcacaggtcgagttgactggcagtagtgtgttcgattacatccaccctgcggat
catgtcgaaatggcagagcgtcttggcattaggccacacctccgggcggaggcaggctgt
caaacgtcccacgagagtgcttcaagctccgcctccgcatcctctctggctggcacccct
gaaccagcaccatccagcccctgttctcctgtcagagagttgtcagaacgtggcttcttc
atccggatgaaatccaccctcaccaagcgtggcctccacgttaaatcctcgggctataaa
gtgattcatgtgacaggtcggattcggtgtcggccagccctggtgccaggctcctcccgc
cccttgcatcggccaatgggattggtcgctctagcccacacgcttccgccctccacgctc
aatgaggtgcgcatggaaagtaacatgtttgtcttccgtgtcaacatggacctgcagatc
acctactgtgagaacaggatttcggagtatatggacctgagcccagctgaggtagttgga
caaacctgttaccactttatccatgcagaagacctggacaccgtcaggcagagccatgat
gacttgctgcggaaagggcaggttgtgacggggtattatcggtggctgcagaggagagga
gggtatctgtggattcagtcctgtgccaccgtgtccattaaccacaaagcgccccatgag
cgtaacgtcatctgggtcaactatgtgctcagtcgaccagagctgccagacatgcctctg
gacttattacaacttccagaaagcctgagggcagagcggcttcaagcaagctcctcccca
cgtgatacctctccaaaggcacaaggctccacggcgacacagccattgaaaggcaggtct
gagaaagaccacaaagggaaggaacccttttcgcacactgctgccagccaatcagagagc
accaggaagagatcgcaccagtctgacgctgaaagtggtcctcccgaggcgaggaggcgg
attgaggtgttccgtcagagagatgacagcccatgtacctcttcggaccaagccagcgac
agcgaggtggaagaggatgatgagagagagagcgagtgggaccacaaccccaccagtaaa
cgggtgaagagtgaagagggggcactgaaactaggcaatggggccaatggagcaggtaag
atccacaacggccgcgctgtgatccagcatcttaagagcgtggtgaccagctccgggtcg
aatattaagactgaacaagaagtgataggaactgtaggtgtaggttctgggaggcgttgg
agccaacctcagcccagcagtgtaggaaccaatggcagcagtccaccttcccaacctcca
aactccaccccgacagaagctccacccaagggtctgttcaacccaccatccccaactctg
tctccacccatctcagcctcgtccctgcccagagatgaccggtccatccacggagggcgt
gctccagacttcgagctactgcagagactgactgcgagtggggccgcaggacgtgtgctc
tttcaccccctggctcttggcccacaggggcctcagagtctttacgctcccagcaccatt
cgctacgccccacctgaaatgcctacagctcactctgatgggcaccgttcagaccacctg
gccaaaacccccgctttctttccccacctgcaaaggattgcatctctgcctccttttagt
ggcttttctccagccgaacccacctttcctccaactctgcccttctgtatgaacggactg
aggggggcggcagggacagatgaagattga
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