Megalobrama amblycephala (Wuchang bream): 125249476
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Entry
125249476 CDS
T08212
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125249476
04121 Ubiquitin system [BR:
mamb04121
]
125249476
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125249476
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125249476
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Gene cluster
GFIT
Motif
Pfam:
DUF659
zf-BED
Dimer_Tnp_hAT
PSY3
Mtrc-MtrF_II-IV_dom
DUF711
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
125249476
NCBI-ProteinID:
XP_048017733
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Position
LG16:1857441..1859296
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AA seq
547 aa
AA seq
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MADSDTCKDENNKTEDEIVPAPAAFKSDVWKHFGFAVSKNAKGEKVVDRQWTMCKHCHSK
LRYNTGNTSNMQSHLTTHHPEKFADSLTKKVLSVDGKGFKRLVAKLEPKYQMPSWAHFSQ
TVFPALYRETKERVMLNLKQSECIAITTDGWTSRATHSYITITAHVLTSEWEMQSYVLQT
RQLSESHTGVNIAEVLKSAVKEWGLDKIGTRIAVVTDNASNMRVAVKEAELSPHIRCFAH
TLNLASQAGLKVNAVSRLLGRVRRVASFFHRSSTATAVLTTKQKLLNLPVHKLIIDVVTR
WNSSLDMVERYLEQQQAVAAALLSDELRHKSREIDTLDASDIANAEDLVKILLPIKKATT
VLCDELQPTISLISPLKQMIQDSMATDNHDSNAIALMKVAILKDLTDRYQGEDEKFMQES
SAFDPCFRTLQHLGSGEREDVFERKASQMQQQDQDVLPRSPHPADLDDSSASFVPPLKKH
ALEDLLGSSFSSNQVTGGIQAEIDSYCKEALVSLSACPLKWWRDNAGRYPILSSLAKTYH
TRYLGAQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccgacagcgatacttgtaaggatgaaaacaacaaaaccgaagatgagattgtgcca
gcccctgcagcttttaaatcagatgtctggaaacattttggtttcgccgtgtcaaaaaac
gcaaaaggagagaaggtggtggacagacaatggactatgtgcaagcactgccacagtaag
ctgcgatacaacacaggaaacacaagcaacatgcaaagtcatctgacgacccatcatccc
gaaaagtttgcagattctctcacaaagaaagtcctgtccgtagatggcaaaggatttaaa
aggttagtggccaagcttgagccgaagtatcaaatgccgtcgtgggctcattttagtcaa
actgtgttccctgctctttaccgtgagacaaaagaacgtgtcatgttgaaccttaaacag
tctgagtgcattgctattaccactgatgggtggacttccagagcgactcacagttacatc
actattacggcacatgttttgacgagtgaatgggaaatgcagagttacgttttacaaact
agacagcttagcgaatcacacactggcgtaaacatagccgaagtccttaaatctgcagtc
aaagagtgggggctggacaagattggaacaaggatcgctgttgttactgacaacgcaagc
aacatgcgagtagcagtaaaggaagccgaactgtcccctcacatacggtgctttgcgcac
acactaaacctggcctcccaagcaggtttaaaggtcaacgcagtgagccgcctccttggt
agagtcagacgtgtagctagtttttttcaccgcagttctacagccacagccgtgctgacc
accaaacaaaaactactcaatctccctgtacataaactcattattgatgtagtgacaaga
tggaatagctctctggacatggtggagcgctaccttgaacagcaacaagctgttgctgca
gccctactgagtgatgaactgagacacaagtcacgtgaaattgacactttggacgcatct
gacattgcaaatgcagaggatcttgtgaagattcttttaccaataaaaaaggccacaact
gttctctgtgatgagttgcaaccaacaatatctctcatttcaccactaaaacaaatgatt
caagacagcatggccacagataatcacgactcaaatgccattgctctgatgaaggtagcc
attctgaaggatcttactgacagataccaaggagaggatgaaaagtttatgcaggagagc
agtgcttttgatccatgctttcggaccttgcaacatctaggcagtggagagagagaggac
gtctttgaaagaaaagcatcacagatgcaacaacaggaccaagatgtgctgcccaggagc
ccacatccagcagatctggacgacagcagtgcgagctttgtgcctcctcttaagaagcat
gcccttgaggacctccttggctcttcttttagcagtaatcaagtcacaggtggaattcag
gcagaaattgactcttactgcaaagaagcattagtttctctgtctgcttgccctcttaag
tggtggagagacaatgcagggcggtatcctattctgtcttcattagcaaagacctaccat
acccgctacctcggtgcccagtga
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