Megalobrama amblycephala (Wuchang bream): 125249984
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Entry
125249984 CDS
T08212
Symbol
tpra
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125249984 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125249984 (tpra)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125249984 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
ATG17_like
Motif
Other DBs
NCBI-GeneID:
125249984
NCBI-ProteinID:
XP_048018218
LinkDB
All DBs
Position
LG17:complement(29169384..29195910)
Genome browser
AA seq
2354 aa
AA seq
DB search
MAALLQQTLERSEINKLPKAIQNKLEKVLSEQQTEIDSLKSQHERYKADCEQQYFNLEKK
LAESQEQFLSQSKEYHSIKEENSRLSEELKKLKDIEEEQGTTQESTPPRAKYEIEAENRE
LSRMLEKRSQEVENLSEDLKRLNDKLAETSTIKMELQLKLDELQSSEVSIQHREKRMEQE
KELLQNQNTWLNSELKSKTDELYTVSRDKGKEILELRCSLETKKEEVTRLQDQVNTLKKN
NDNMQKSTEDLMNKLREAKEQRASMEEKYRNELNANLKLCNLYKDAAADSESKNAELNRA
VEELNKLLKEAMEANKGTEKKLSELRGVREKAESDLHEKVRNLEKELENANTRLAEFKRR
GVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHLEKLESKRVNKVLDE
IVLEVETKAPILKRQREEYENMQKSMTSLCAKLEQAMKEVHRLQKETDEANKRALGLERD
NQRSKRQLADMSEQVSVLLVEVEEARGNQVVREDLSSAVSSSSEVQGSRQVAFRSVQELQ
QQNQNLLAQIRDLEEQRERDQNQAKTARQTELEQSLEKVQKELEQIKEQQNHQKQLADSA
IRQRDMYRILLQTAGVELPPQGSGSEAGSQSTTPNRPGPMSTRSTPLRSAASESYQATQA
KAALKQLNDAFVTYKKEKAENDKLLNEQIERLRGQVSDLLSQKAKLSSQLEFAFKRYEML
QENVNGFRREIEALREKNQKMSATHQRHEQIIHTMTQDLREANEKLTMAELRVENIRKER
DILKQVENRLSQEKESVLTEQRGQNLLLTNLKSIQLMTERSETETKQRYNNHIQRLEKEI
IQLKKKLEQEVEQRHALKRNQDAQLLEVKKQLEAQTALHQKTKELLRTAEQQATSMRQQL
NNENLGTAPKQPVRTLPRVSAPGVPQQEVDELQARLQQVEEQNSDLKERLKNTTTNVEQY
RSMVLSLEESVNKEKQLAEQARTSIDSQLKTARELNQQLEARLLEAEKEKLELQEEKMKA
VESVEERVKELKRSMTDMQTELQDALQRAAAAVAQEQRATQDSKLQAKLAAEAQNKYERE
LMLHAADVEALQTAKKQGQLSAQNLKQLEDKAQKAASELHQGRTNWEQQEKRLREELSKE
QKRAEELQKQNTMLHEQMENLSSKKTASTQQQTARESSLNISLNEEGKSHEQILDILRFV
RREKEIAETRLEVAEVETLRYKQRMEYLEGELKELQDSLNAEREKLQVTTKTLTQKEDMM
KRMESMSALTETNKMLKNEKNRLEHELQQTKAKMRKLEADIKPLLDSNAELSEKSGMLQA
EKKLLEDDVKRLKARTQQLLSQQKDTDQEESKKLNSEREAHLKRIQQLTEETGKLKNEVA
RSQASITTAQSQVQNLQDSLGKVTTERDNLKKELEAKTLDIQEKLKTITQVKKIGRRYKT
QFEELKEQHDKMVAEAASKPAQEQEDRQASVQEIQNLKSSLSQSQNRSSELETQLESIQK
TVQEREAEVKSLQEQLAQVQPELNRLRAELQEKGNLEEQLRQQIADKEEKTKKAFMGAKQ
KINQLNSAKEQLVKENEELKQQREELEVRMSALKSQYEGRLNRLERELRELREQQERHGE
QRDEAQEPGQSKVQEAQRSSDPRQITLKPTPTTDRGSASTSEPPTANIKPTPVAATPSKP
SPIAGSKSTPRASIRPMVTPAPVTTPTATVMPTTQVETQEALQSIEGPLEHVTVFGSTSG
SVRSTSPNIQTTQPILSLQQNQATAFVQPTQQQASQESATTIMEAVHSSQMERPSTSTAV
FGTVSATAGSSVPKRVREEEQESSTEVTDTTTDDPTHPPINKKIRIIRRVGLEVSSDASG
TEESNDAMGEASGEVQQPSDASEEAYPVLAEGDEESLSQSVPMDQVSESQPSESQISGQD
SSEEYKHDVIIIETDSGTEEEEEEQEEPGQYEDDDDDAEDDEDEDGDGEMAEAAEESNEG
SGSADANEAYEGDEAEGGGAADPGIDNEESQEASGSIQKQADSQSSGEASVSTLEAFPAE
PVREHQPVPSTTTSCLGPRLPQSPRRPHHTPPPRLNIHPIPELGPPIMQRQPGQSRRPSM
SRAPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPE
DMMPQASSSHSDLSHLATHGGLGMYECPLFLPAHDEESGGRSVPTTPLQVAAPVTVFTES
HPSDVSETASQSVPMVSTSTGSLTTPGEAVPGDDGDDVFVAEAESEGASSEACLEGQSEL
ESTQPLDDASLPSTSQEPTSSSADTSTSTSTGQAKPASRLLPQHQLPRRNQLIRRGIDFP
RGGRGRGLNRGTPI
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttcttcagcaaacactggagagaagtgagataaacaaactgccgaaagcc
attcagaacaagctcgagaaagttctgtcagagcagcagacggaaatagactcactgaaa
tcacagcacgagcggtataaagcagactgtgagcaacagtactttaatcttgagaagaag
ctagctgagagtcaggagcagttcttgtcccaaagtaaggagtatcacagtattaaggag
gagaacagccgtctctccgaggaacttaagaagttgaaagatatagaggaagagcaggga
acaacgcaagagagtacgccgccaagagccaaatatgaaattgaggcagaaaaccgagag
ctctcacggatgcttgagaagagatctcaagaagtggaaaacctcagtgaggatctcaaa
cgcctcaatgacaaactcgcggaaaccagcacaatcaagatggagctccagcttaaacta
gatgaacttcagtcatctgaggtttccattcagcatcgtgagaagcgaatggaacaagaa
aaggagcttctccagaaccagaacacatggctgaattcagagctgaagagtaagacagac
gagctgtacacagtatccagagacaagggcaaagagatcctggagctcaggtgctcttta
gagaccaagaaggaagaggtgaccagacttcaggaccaagtgaacacactcaagaaaaac
aatgacaacatgcagaagagtactgaggatctgatgaacaaactcagagaggctaaagaa
cagcgggcctccatggaggaaaagtaccgcaatgagctgaatgctaacctcaaactctgt
aatttgtacaaggatgcagcagcagattctgaatccaagaatgctgaattgaacagagct
gttgaagagctcaacaaactgctgaaggaggcgatggaagcaaataaaggcacagagaag
aagctgtcagagctgcggggtgtgagggagaaagcagaatctgatctacatgagaaggtc
aggaatctggagaaagagctggagaacgccaatacacgccttgcagaatttaaaaggaga
ggtgttccagctctcacagaagaggagctgacaaacctctcgccaactgcagctgcagtg
gccaagattgttaagccgggcatgaagctaatggagttgtataatgcctttgtggaggcg
caagaccagctgcacctggagaaactggagagcaagcgtgtgaacaaggttctggatgag
atagttctggaggtggagaccaaagctcccattctgaaacgccagagagaggaatatgag
aacatgcagaagtccatgactagcctctgtgccaaactggagcaagctatgaaggaggtc
catcggctgcagaaggagacagatgaagccaataagagagctttagggctagagagagat
aatcagagatcaaagagacaactagcagacatgtctgaacaggtaagtgtgctgctggtg
gaggtggaggaggcacgtggtaatcaggtggtgcgtgaggacttgagctcagctgtgagc
agcagctctgaggtccagggctcacggcaggtggccttccgcagtgtccaagaacttcag
cagcaaaaccagaaccttctggcccagatcagagacctggaggagcagagagagagggat
cagaaccaggctaagactgccagacaaacagagttggaacagagtctagagaaggttcag
aaggaactagagcagatcaaagaacagcaaaaccaccagaagcagctggctgactccgcc
atccgacaaagggacatgtatcgtatcctgttgcagacagccggagttgagcttccacca
cagggttcaggttcagaggctggatctcagtctaccactcccaacaggccaggacccatg
tccaccagatctacacccctgaggtctgcagcttcagaatcttaccaggcaactcaggct
aaagcagctcttaagcagcttaatgatgccttcgtaacatataaaaaggagaaagcagaa
aacgacaagcttctgaatgaacagattgagaggcttcgtggtcaagtgtctgacttgctt
tcacaaaaggctaaactttcctctcagctggagtttgcatttaaacggtatgagatgctt
caggagaatgtgaatggctttcgacgagagattgaagccctgagggagaagaatcaaaag
atgagtgccactcatcagagacatgagcaaatcattcacacaatgactcaagatctgagg
gaggccaatgagaaactaaccatggctgagttgcgcgttgagaatatccgtaaggaacga
gacattctgaagcaggtggagaacagactgtcccaggagaaggagtctgtcctgaccgag
caacggggccagaatctcctgctcaccaacctcaaatccattcagcttatgacggagcgc
tctgagactgagaccaagcagcgctacaataaccatatccagcgtctggagaaagagatt
atccaattaaagaagaaactggaacaggaggtggaacagagacacgcactgaagcgcaac
caagatgctcagctgctggaggttaagaaacagttggaggcacagacagcacttcatcag
aagactaaagagctgctaagaactgctgaacagcaggccacctccatgagacagcaactg
aacaacgagaaccttggcacagcacctaaacagcctgtcaggacattacccagagtttca
gctcctggcgttcctcagcaggaggtagatgagctccaagcacgtctacagcaggttgaa
gaacagaactctgacctgaaggagcgtttgaagaataccaccaccaacgtagaacagtac
agatccatggtgctcagcttggaggagtctgtaaacaaagagaagcagttggctgagcag
gcacggacatccattgacagccagctgaagacggcacgggagttgaaccagcagctggaa
gcccggctgctggaagcagagaaggaaaagctggagctccaggaggagaagatgaaagct
gtagagagtgttgaagaacgggtgaaggaactgaagaggagcatgacggacatgcagacg
gagctgcaggatgccctgcagagagctgcggcagcggtggcccaggagcagagagccacg
caggacagcaaactacaggctaagttggctgcagaggctcagaataaatacgagcgagag
ctcatgctgcatgctgcggatgtggaagccctacagacagccaagaaacagggacagttg
tcagcacagaacctgaagcagctagaggataaggcccagaaagctgcatctgaactgcat
cagggtcgcacaaactgggaacagcaagagaagagactgagggaagaactttctaaagag
cagaagagagccgaggagctgcagaagcagaacaccatgctccatgagcagatggagaat
ctgagcagcaagaaaactgcctccacccagcaacagactgctagagagagcagtctgaac
atctctctgaacgaggagggcaagtctcatgagcagatcctggacatccttaggtttgta
cggcgggagaaggagattgctgagacccggttggaagtggcggaggtggagaccctgcgc
tataaacagcgcatggagtacctagagggagaactgaaggaactacaggacagcctgaat
gcagagagagaaaagctacaggtgacaacaaagaccttgacacagaaggaagacatgatg
aagcggatggagagtatgagtgctctgaccgagaccaacaagatgctgaagaatgagaag
aacagactggagcatgaactacagcagactaaggccaagatgcgcaagctggaagcagac
atcaagcccctactggactccaatgctgagctgagtgagaagagtggcatgttgcaggct
gagaagaaactcctggaggacgatgtcaagcggttgaaagcccgcacacagcaactgctg
agtcagcagaaggacaccgatcaggaggaaagtaagaagctgaattctgagagagaggcc
catctcaaacgcatccagcagctcacagaggagacagggaaactcaagaatgaggtggcc
aggagccaagcttcaattactacagctcagagccaggtgcagaacctgcaggatagcctt
ggaaaggtcaccactgaaagagataatctgaagaaggagctggaggcaaagaccctggac
atccaggagaaactcaaaactatcacacaggtcaagaagataggccgtcgttacaaaacc
cagttcgaagagctcaaagaacagcatgataagatggtggcagaggctgcttctaagcca
gcacaggagcaggaagaccgtcaggcctcggtgcaggagattcagaacctgaagagttca
ttgagtcagtcacagaacaggtcctcagagctggaaactcagctggaaagcatacagaag
acggtgcaggagcgtgaagcagaggtgaagagcttgcaggagcagctggcacaggtgcag
ccagagctcaaccgtttgagagcagagctacaggagaagggtaacctggaggagcagctc
cgacagcagatcgctgataaagaggagaagaccaagaaagctttcatgggtgccaagcag
aagatcaaccagctcaacagtgcaaaggagcagctggtgaaagagaacgaggagctgaag
caacagagagaggagctggaggtgaggatgagtgcactcaagtcacagtatgaaggccgg
ttgaaccggctggagagagagctgagggaactccgtgagcaacaggaaagacacggagaa
cagagagatgaagctcaggagccaggccagagcaaggttcaagaagcacagaggtcatca
gatcctcgacagatcactctcaaacccacacctactactgacagaggaagtgccagtaca
tccgagccacccaccgctaacatcaagcccacaccagttgctgccacccccagcaagcct
tcgccaattgcagggagcaagtccaccccgagggcaagcattcgcccaatggtaaccccc
gctcctgtaaccacgcccacagccacagtcatgcccaccacacaggttgaaacgcaggaa
gctctgcagtccatagagggtccacttgagcatgtgactgtctttggcagcaccagtggc
tcagtacgttccaccagccctaacatacagaccacacagccaatactcagcctgcagcag
aaccaagccaccgctttcgtccagcccactcagcagcaggcaagtcaggaatcagcaacg
accattatggaggcagtacatagctcacagatggagaggccgtccacttccactgctgtc
tttggtacagtgtcagcaacagcaggctcatctgtgcccaagcgagtgcgagaggaagag
caggagagctccactgaggtgaccgacaccacaacggacgacccgacccacccacccatc
aataagaagatccgcatcataagaagagtgggcctggaggtgagcagtgatgcttcaggt
actgaggagagtaatgatgctatgggtgaagcttcaggagaagtccagcaaccttctgat
gccagtgaggaagcatatcccgtattagcagagggagatgaagaatctttgtctcagtct
gtcccaatggatcaggtgagtgagtcccaaccatccgagtctcagatcagcggacaggac
tcatccgaggagtataagcatgacgtcatcatcatagaaacagatagtggcactgaggag
gaagaggaggagcaggaggagcctggacagtatgaagatgatgatgatgatgctgaagat
gatgaagatgaagatggtgatggagagatggcagaagcagcagaggagagtaatgaaggc
agtgggagtgcagatgccaatgaggcctatgagggggatgaggcagagggtggtggggca
gctgatccaggcattgacaatgaagagagtcaagaagcatctgggtcaatccagaagcaa
gcggactctcagagcagtggtgaagctagtgtcagcaccttggaggcttttcctgctgag
cctgtgagagagcaccagccagtccccagcaccaccacctcctgcttgggaccacggctg
ccccaatccccccggagaccgcatcacaccccacctccacgtctcaacatccaccccatc
cctgagcttggaccgcccatcatgcagaggcagccaggacagagcagacggccctcaatg
agtcgtgcgccccagctcacgcctggaatcggaagcatgcaacacttctttgatgatgat
gacagaatggttcccagcactcccacccttgttgtgccacaccgcacagacggctttgca
gaggccattcattcccctcaggtggccggagttcctcgtttccgtttcggccctcctgag
gacatgatgcctcaggccagctcctctcattctgacttgagccatctggccacacatgga
gggttaggcatgtatgaatgtcctctcttcctgcctgctcacgatgaagaatctggagga
aggagtgttcccaccacccctctacaagtggctgctccagtgacggtgttcacagagagt
cacccctctgatgtgtcggagacagcctctcagtcggttcccatggtgagcacatccacc
ggcagtctgaccacccctggggaagctgtcccgggagatgatggagatgatgtctttgtg
gccgaggctgagagtgaaggggcgagtagtgaggcgtgtctagagggccagtcggagctg
gagtccactcagccgcttgatgatgccagcctgccctccactagtcaagagcccacatcc
agctccgcagataccagcactagcaccagtactggtcaggccaagcctgcaagccgactc
cttcctcagcaccagctgccccggaggaaccagctcatcaggagaggtattgattttcct
cgtggaggccggggtcgaggactcaacagaggcactcccatctaa
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integrated database retrieval system
