Megalobrama amblycephala (Wuchang bream): 125250182
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Entry
125250182 CDS
T08212
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125250182 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125250182 (puf60a)
Spliceosome [BR:
mamb03041
]
Complex A
U2 snRNP components
U2 related factors
125250182 (puf60a)
Complex B
125250182 (puf60a)
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Motif
Pfam:
RRM_1
RRM_7
DUF1543
Motif
Other DBs
NCBI-GeneID:
125250182
NCBI-ProteinID:
XP_048018577
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Position
LG17:complement(36330344..36348579)
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AA seq
576 aa
AA seq
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MAVAVSAVNGGEALMMENGQSTASKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTL
AHQQQQLSNLQLPNSLQMASLTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGE
DTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKV
GRPSNIGQAQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPT
TGKHKGYGFIEYDKAQSAQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAA
AVAAAAATAKITAQMAWNLSQPENRTEDFLNCLHLLVERFFSSSGLIDRLNQLSSEHEAV
AGASILGAMTGGSGLNLPQLPQAVMAAQAPGVITGVTPARPTLPVVPQVGLVNPVLASPP
SLSAAVAAAQEAKKEKEEEEAAQDGTGQEMLSEQEHMSISGSSARHMVMQKLLRKQESTV
MVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAAS
EMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDLSA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtttcagcggtaaatggaggcgaggctctgatgatggagaatggacag
agcacggcctcgaagctcggcctgccgcccctcacccccgaacagcaggaggcgctgcag
aaggcaaagaagtatgccatggaacaaagcatcaagagtgtcctggtcaaacagaccctc
gcccatcagcagcaacagctcagcaacctacagctccctaattcccttcagatggcctca
ttaacgatgggctttggagatcccctctcaccactacagtctgttgcagcacagaggcaa
cgggcattagccataatgtgccgtgtttatgttgggtccatctactacgagctaggagaa
gacaccatcagacaggcctttgctcctttcggtcccattaagagcattgacatgtcctgg
gactctgttacattaaaacacaagggttttgcatttgtagagtatgaagtaccagaagca
gcacagctcgctttagaacagatgaactccgttatgctgggtggtagaaacattaaagtg
ggacggccgagcaacattggtcaggctcaaccgatcatagaccagctagccgaagaagcg
cgcgccttcaaccggatttacgtggcgtctgtgcatcccgatttgtcagacgacgacatc
aagagcgtgtttgaggccttcgggagaatcaagtcttgcaccctggcgcgggaccccacg
acgggaaagcacaaaggctatggcttcatagaatatgataaggcccagtctgcgcaggac
gccgtttcctccatgaaccttttcgacttgggcgggcagtacctgcgagtgggcaaagcc
gtcacgccacccatgccccttctgaccccagcgacgccgggcggactgcctcctgctgct
gccgtagccgctgcagccgccactgccaaaatcacagcacagatggcatggaatctgtcc
cagccggagaatcggacagaagacttcctcaactgtctgcatctgttggtggagcgattt
ttctcctcatctggccttattgacagactgaaccaactttcatccgaacatgaagcggta
gcgggagcgtctattctgggagcgatgaccggcgggtcgggcctgaacctgccccagctt
ccacaggccgtcatggctgctcaggccccaggggtcattacaggggtgacgccagcccgg
cccacgctgcctgttgtgcctcaggtgggccttgtgaacccggtgttggcctctccgccg
tcactgtcggcagctgtggctgcagcccaagaggcaaagaaggaaaaagaagaggaggaa
gccgctcaagacggcacgggccaggagatgctcagtgaacaggagcacatgagcatctcg
ggcagcagcgccaggcatatggtcatgcagaaactgctgagaaaacaagagtctacggtt
atggtgctcaggaacatggttggacctgaagacatcgatgatgatctggaaggagaagta
acggaggaatgtgggaagttcggagccgttaatagagtgatcatttaccaggagaagcag
ggtgaggaggaggatgccgaagtcattgtgaagatctttgtagagttttcagcagcatca
gaaatgaacaaggccattcaggcgctcaacaaccgctggttcggaggtcgcaaggtcatc
gctgaggtgtacgatcaggaacggtttgacaacagtgacctctccgcatag
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