Megalobrama amblycephala (Wuchang bream): 125250375
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Entry
125250375 CDS
T08212
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125250375 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125250375 (vcpip1)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125250375 (vcpip1)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C64
125250375 (vcpip1)
Ubiquitin system [BR:
mamb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
125250375 (vcpip1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
Gla
Motif
Other DBs
NCBI-GeneID:
125250375
NCBI-ProteinID:
XP_048018857
LinkDB
All DBs
Position
LG17:11543609..11551464
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AA seq
1108 aa
AA seq
DB search
MSLIPGSKQKDRRILCGMCPDPQCQAKLFFPAHTSMSIECTECGQRHEQKNLANVEEVTD
PDVVLHNLLRNALLGVPGPPKKGSELVKVMGLSNYHCKLLSPILTRYGMDKQTGTAKLLK
EMNQGDIFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLIYLHDTLEEIKKANLNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLNFKQNLNHYKALFQDFIDAAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSPGDYSATFLPGLVPEE
RCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGLPLPRLPAALLPKAWGVPQELIRKYVS
LDSSGSCVIGGDRSLQDKYLLRLVGAMEDVFMDKYGIHPALVADVHQYIYRRTGVIGVQP
EEVTEAAKKSVQEGRLHRCLVCNALSELHAPAEWLIPGGKLYNLAKSTHGTLRADKNYSF
PLNSLVCSYNPEKDVLVPDYKLSSLTACTWCHGTSVRRVQGDGSVVYLDGDRTNTRSQGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYETDPTLNSNVYDVTMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKRSQDEYNPVAIEGAHVQDGGIGSESSTRPPTKI
ILTGQKGKTLHKEELVMSRTERVLQHSISEQAALSQRRSTDRVRQQDPRPSSPSSSSSSA
PPTPTKVPPTSGEKKIRVTTSDGRQAMLTLQPHTTYSDLQNSIIQVFNLSPGQLCIRHGF
PPRELPPPRPEDQNQPVALQHGDRISVEALKESSPDTHMTQTHTHAPQTHAHSDPHLSRT
SSRELQDNIDLEMSSLCLLAALMGEDVWSYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHC
TLPHLSGKTFVFNASEERLELCVDTAGHFPVGPDVEELVQEALSQLRSDAASRSREGSPA
HSLRLGTGGAVRKKEQNVTVFQGKGHSLGSAPPEHPPIRRQHSSGVDLSSSVREEGLTLS
GEDLVRVAPGMLTLREGRGMGLEPAVIEAQRQRLQEMVSSIQASMDKHLRQHAAARHDGE
EEETPEKQEEMEGHGAEPPNTFEPMDQS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgattccgggctcaaagcagaaggacaggcgcattttatgcgggatgtgcccg
gacccgcagtgccaggcgaagctcttcttccccgcacacacctccatgagcatcgagtgc
acggagtgcggccagagacacgagcagaagaatctcgcgaatgtggaggaagtgactgac
ccagatgtagtgcttcacaatttgctgagaaatgctttgctgggcgtgccaggccctccc
aaaaagggctcagagctggtgaaagtgatgggactgtccaactatcactgcaagctgctg
tcacccatcctcactcgctatggcatggacaaacagacgggcactgccaaacttttgaag
gaaatgaaccagggagacatcttcgactgctcgcttcttggtgaccgtgcatttctcatc
gagcaagagcatgtgtcaactgttgggtatggacgtgatcggtcagggagcctgatctac
ctgcatgacactttggaggagatcaagaaagcaaacttgaatagagagtgtcttattccc
gtgcatgtggatggagatggacactgcctggtccatgccgtgtccagggctttagttgga
cgtgagctgttctggcatgcccttcgagagaacctaaaactcaatttcaagcagaacctc
aaccactacaaagctcttttccaggactttatagatgccgcagaatgggaagacatcatt
aacgagtgtgacccgttgtttgtacctccagaaggcgttccattgggcctgaggaacatc
cacattttcggcttggcaaatgtactgcacagacccataatcctattggactcactgagc
ggcatgcgcagcccaggcgattactccgccaccttcctgccgggcttggttccagaggag
cgttgccgaggaaaagatggcactctgaacaaacccatctgcatcgcctggagcagctct
gggagaaatcactatctgcccctagtgggaatcaagggcttgcctttgccccgtttgcct
gctgcgctgctcccgaaagcttggggtgttcctcaagagctgattcgcaaatacgtgagc
ttggactccagtggaagctgtgtgatcgggggggaccggagcctgcaggataaataccta
ctgcggcttgtaggcgcaatggaggatgtcttcatggacaagtacggcatccaccccgct
cttgtcgctgacgtccaccagtacatatatcgacgcactggagtgatcggcgtgcagccg
gaggaggtcacagaagcagcgaagaaatccgttcaggagggccgtctccaccgctgcctt
gtctgcaatgccctttcagagctccacgcaccagcagagtggctcattccgggagggaaa
ctctacaacttggccaagtcgactcatgggacgctgcgagcggacaagaactacagcttt
cctttgaatagtttggtttgttcctataacccagaaaaagatgtgctcgtgcctgactac
aaactcagctcgctcacagcctgcacctggtgtcacggaacctcagtgcgacgcgttcag
ggcgacggctctgtagtctatttggacggagaccgtaccaacactcgctcgcagggtggg
aagtgcggctgtgggttcaagcacttctgggaggggaaggagtatgacaatcttcccgaa
gccttccccatcactctggagtggggcggccgtgtggtgcgagagaccgtttattggttc
cagtacgaaacggatccgacgctcaacagtaacgtttacgacgtgacaatgcggctcgtc
acgaagcacttccccggtgagtttggcagcgagatcctagtccaaaaagttgtgaacacc
attttgcatcacaccgccaagcggagccaagacgaatacaatccagttgccatagaaggt
gctcacgtgcaggatgggggaatcgggagtgaatcgtccactcgccctccaactaaaatc
atcctgactggacagaagggcaaaaccctgcataaggaggagctggtgatgagcagaact
gagagggtcttgcagcacagcatcagcgagcaggcagccctctcacagcgccgcagcacg
gaccgcgtgcgccagcaggatcctcgcccgtcatccccttcctcttcatcatcttctgca
cctcccactcccaccaaagtgccacccaccagtggagagaagaagatacgtgtaacaacc
agcgatggccggcaggccatgcttacgctgcaaccgcacaccacctacagtgatctccag
aactccatcatccaggtcttcaacttgtcacccggacagctgtgcatccgacatggcttc
ccgcctagagagctgcccccaccacgtcccgaggaccagaaccagccagtggcactccag
catggtgaccgcatctctgtggaagcgctgaaagagagctcacccgatactcacatgacc
cagacgcacactcacgcgcctcaaacgcacgctcactctgacccacacctcagtcgcacc
agtagcagggaacttcaggacaacattgaccttgagatgtcatcactctgtctcctggca
gcacttatgggtgaagatgtctggtcttatgctaagaaactgcctcacctgttccagcaa
ggaggagtcttctacaatattgtgaagaaagacatgggtctgttggacgggaaacactgc
acactgccccacttgtctggaaagacatttgtgttcaatgcatcagaggagcgtttggag
ctgtgtgtggacacagccggtcattttccagtgggccctgacgtagaggagctcgtccag
gaggcactttctcaactccgctcagacgcagcctcccgtagccgcgaaggaagccccgcc
cacagcctgcgattgggcaccggcggcgcagtgcgcaagaaagagcaaaacgtcactgtc
ttccagggcaaaggccactcattgggttccgcccctcctgaacacccaccaatcaggagg
caacacagcagtggtgtggatctcagcagcagcgttcgcgaagaagggttaacgttgtcg
ggggaggatttggtgcgcgtggccccgggcatgctcactttacgcgagggccgcggcatg
gggctggagcccgctgtgatcgaggcccagcggcagcgcctgcaggagatggtctcaagc
atacaggcgtccatggacaaacacttgcgccagcacgcagcagcaaggcatgatggggag
gaagaagagactcctgagaaacaggaggagatggagggtcatggggcggagcctcccaac
acctttgagcccatggaccaatcctga
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