Megalobrama amblycephala (Wuchang bream): 125250414
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Entry
125250414 CDS
T08212
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b
KO
K08533
RAR-related orphan receptor beta
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125250414 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mamb03310
]
125250414 (rorcb)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125250414 (rorcb)
Nuclear receptors [BR:
mamb03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125250414 (rorcb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125250414
NCBI-ProteinID:
XP_048018938
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Position
LG17:6592189..6612530
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AA seq
486 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQLSQECLAGLGGGLTSRDR
EESGEDSAHSRPYSSGGSSSNLSDLDDIATLPDGLLFDLPLTPEEAGEYCALEMLGGSSG
FGSAGSGSSSNQSSPEPSAVDLADAVRVKHEYILPENSLLTHSLLSSLPDNCSLHDIERI
TQNVVKSHLETCQYSPEEMKKVTWNLYTPEETRSFQLKSAEWMWQQCALHITNAIQYVVE
FAKRISGFMDLCQNDQIILLKAGCLEVLLIRMCRAYNSSNNTMFFDGKFASPQLFKALGC
DDLVNTVFELAKSLSRLQLSEEEMALFSAAVLLAPDRPWLTESQQVQKLQEKVYVALQHS
LHMNGATTEKLDKMVSKLPQMKSICNLHIDKLEFFRLVHPETAYSFPPLYREVFGSEINF
PDSTNS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatcgaggttataccgtgtaagatctgtggcgacaaatcctccgggatt
cactatggcgttattacgtgtgaagggtgcaagggttttttccgacgcagccagcagaac
aatgccatgtactcatgttcacggcagaggaactgcctgatcgaccgaactaaccggaac
cgctgccagcactgtcgtctgcagaaatgcctggctctcggcatgagccgtgatgcggtg
aagtttggccgaatgtcaaagaaacagcgggacagcctgtatgcggaggtgcagcggcac
cagcagctgtctcaagagtgtctggcgggtttgggtggcggtctgacatcacgtgaccgt
gaagagtcgggcgaagacagcgcacacagccggccgtacagcagcggaggttccagctcc
aatctcagtgacctggacgacatcgccacgctgcccgacggtttgctattcgacctgccg
ctcaccccggaggaggctggcgagtactgcgctctggagatgctcgggggcagcagcggg
tttgggagtgcaggaagtggaagttcgtcaaatcagagctctccagagcccagcgctgta
gatttggcagatgcagtgagggtgaagcatgagtacatcctgcctgaaaacagcctactt
acacattctctcctgagctctttaccagacaactgctctctacacgacatagagcggatc
actcaaaacgtggtgaagtctcacctggagacgtgtcagtacagcccagaagagatgaag
aaagtcacctggaacctctacacacctgaagaaacacgcagctttcagctcaagtctgca
gaatggatgtggcagcagtgtgccctgcacattacaaacgccatccagtacgttgtggag
ttcgctaagcgcatctctggattcatggacctttgccagaatgaccagatcatcctgctc
aaagcaggatgtctggaagtcctgctgatccgaatgtgtcgcgcttacaactcttccaac
aacactatgttttttgatggcaagtttgccagccctcagctcttcaaagctctcgggtgt
gatgacctggtgaacactgtctttgaattggctaaaagtctgagtcgtcttcagctgagc
gaggaagaaatggctttattcagcgccgcggtcttgctggctccagatcggccgtggttg
acggagtctcagcaggttcagaagctccaagagaaggtctacgtggcacttcagcacagc
ctgcacatgaatggagccactactgagaaactggacaagatggtgtccaaactaccacag
atgaagtcgatctgtaacctccatattgacaagctggagttcttccgcctggttcacccg
gaaacagcctacagcttcccgcctctgtacagggaagtgttcggcagcgagatcaacttc
cctgactccaccaacagttag
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