Megalobrama amblycephala (Wuchang bream): 125250446
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Entry
125250446 CDS
T08212
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03020
RNA polymerase
mamb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125250446 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
125250446 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125250446 (polr2d)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125250446 (polr2d)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
125250446 (polr2d)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125250446 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Rop
Motif
Other DBs
NCBI-GeneID:
125250446
NCBI-ProteinID:
XP_048018978
LinkDB
All DBs
Position
LG17:complement(22347826..22356887)
Genome browser
AA seq
141 aa
AA seq
DB search
MAAGGATHVGDVEEDASQLMFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSEVF
MKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLEGR
FEDEELQQILDDIQTKRSFQY
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggaggagcgacgcatgtgggggatgtggaggaggacgcgtctcagctcatg
tttcctaaagagtttgagaacgcagagacgctgctgaactctgaggttcacatgttgctg
gagcatcgcaagcagcagaatgaaagcgcggaggatgagcaggagctgtcagaggtcttc
atgaagaccctcaactacaccgccagattcagccgtttcaagaacagagagaccatcgcc
agtgtgcgcagcttacttctgcagaaaaaacttcacaagtttgaattggcaagtttagca
aatctgtgtcctgaggctgcagaagaggccaaagccctcatcccaagcttggaaggccgg
tttgaggatgaggagttacaacaaatcctggatgacattcagaccaaacgcagcttccag
tattga
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