Megalobrama amblycephala (Wuchang bream): 125250497
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Entry
125250497 CDS
T08212
Symbol
ptbp2b
Name
(RefSeq) polypyrimidine tract-binding protein 2b isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125250497 (ptbp2b)
Spliceosome [BR:
mamb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125250497 (ptbp2b)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
125250497
NCBI-ProteinID:
XP_048019077
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All DBs
Position
LG17:28596005..28609448
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AA seq
538 aa
AA seq
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MDGIASDVAVGVKRSSDELLSGSLYNSPNSSVTANGGDSKKLRVEDSMDSPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVP
VFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDTAGESVLTPAPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSVAAALSKDSTSLLGTPS
GMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSGPGGVLLVSNLNDEMVTPQ
SLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQ
TVQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPENVTEEDLRL
LFSNSGGTVKAFKFFQDRKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagcgatgttgcagttggtgtgaagagaagctcagatgaattgctg
tctggcagtctgtacaacagtccaaactcatcagtcactgctaatggaggtgacagtaag
aaactgagggtggaggacagcatggatagcccaccgtctagagtcattcatattcggaaa
ctccccaatgaggtttccgagactgaggtcatcgcactgggtttgccctttggaaaggtc
actaatatcctgatgcttaaaggcaaaaatcaggcatttttggagctgggaacagaggaa
gcagctgttaccatggtgaactactacacagctgttacacctcaagtgcgtaatgtccca
gtgttcattcagtactccaaccacaaagagctcaagactgacagtgcgctcaaccagcga
gctcaggccgtgctgcaggcggtgtcggcggtccaggagggcggctctccaagctcggac
acggccggcgagagtgtgttaacacctgcccccagcccagtactgcgaataatcatcgac
aacatgttctacccagtcaccctggacgtcctccaacagattttctccaagtttgggacc
gtcatgaagataatcacattcaccaaaaataatcagttccaggctcttctgcagttcagt
gacccagtaaatgcccagcaggccaaactgtctttggatggccagaacatatacaactct
tgctgcactttgcgcatcgacttctccaagctggtcaacctgaacgtaaaatacaacaac
gacaaaagccgggattacacccggcccgagctgcccgcaggagatggccaacctcccgtg
gacccgtctgtggccgccgcgctcagcaaagattccacctccctgctcggtactccctct
ggaatggtaacttcctactctagtggtggagggtttccatcttctctaggggccatcagc
cctctgagtgcggcggcggcggcggcggcagctgcagggagggtagcgctgtctggacat
tcgggacctggtggagtgctcctggtcagcaacctcaacgatgagatggttacgccccaa
agtctgtttaccctcttcggtgtctacggtgacgtgcagcgcgtgaagatcctttataat
aagaaggacagtgctctaatccagatgtctgatgggaaccaagcccagttagccatgagc
catctgaacgggcagaagatgtatggcaagatcattcgcgtgaccctctctaagcaccag
acagtacagctgcctagggagggtttagatgatcagggcctaaccaaggacttcaccagt
tctccactacatcgcttcaagaagcctgggtccaagaacttccagaacatcttcccccct
tccgctacacttcatctctctaacatacctgagaatgtgacagaggaggatttacgactg
ctcttctctaactccggcggtacagtgaaagcgttcaagtttttccaagatcgcaaaatg
gctctgctgcagatgtccacggtggaggaggcgattcaggcactcatcgaccttcacaac
tacgacatgggccgtggtcaccgcctgagagtgtccttctcaaagtccaccatctga
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