Megalobrama amblycephala (Wuchang bream): 125250621
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Entry
125250621 CDS
T08212
Symbol
cacna1eb
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125250621 (cacna1eb)
04020 Calcium signaling pathway
125250621 (cacna1eb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125250621 (cacna1eb)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125250621 (cacna1eb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
PTCRA
Motif
Other DBs
NCBI-GeneID:
125250621
NCBI-ProteinID:
XP_048019255
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All DBs
Position
LG17:complement(22374664..22475354)
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AA seq
2009 aa
AA seq
DB search
MNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYSGKLHHTCLPSPDILDNETVDSSEVEFACGVRKCPDKYTCTGSWIGPNDGITQFDN
ILFAVLTVFQCITMEGWTAVLYNTNDALGPTWNWIYFIPLIIIGSFFVLNLVLGVLSGEF
AKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEVMLAEENKNSGRSALDVLKRAT
SKKNARRRGPGEEKYSEISTVGGPRPRVGIRTARRGPAAYMRRKERMLRISIRRMVKTDS
FYWIVLSLVGLNTICVSIVHHNQPEWLTVIQYYAEFVFLGLFLAEMFLKMYGLGFRLYFH
SSFNCFDCGVIVGSIFEVVWGFFRPGVSFGISVLRALRLLRIFKITKYWSSLRNLVVSLM
SSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGED
WNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKEEEE
EEEEFFNQRYKSREFGLSERRRRPYLYRKRAIHRGRPSPAEAEEEPAVKQGEEQPVNAFA
GRRERRKKINMSVWEQRTNQLRKRRQMASREVLFGSPTEDQMDTPVSDHHQQSCMSPETS
PLHLPESPMSVGIPLPEPPMSITIPLPEPPESEPLPLMGSGLEERPSINNHHSNTERRHR
VARKFRAAAAAGVAEGGRHKRHRHRESRTESRNVENHQQFGCSEKQAEEGVDKMEETQSK
NMMHMYETEIMSGKQIEKQEECQREFVGDVTGQAAGLEELQSVCTGMEDQAESQETPFLR
HKEDFTSDSKYITGEVSDIENNGSYLNQDECITETSIKRETSAQPLLEMAPMTVSFKDVE
ASHSDKADDDDDDYDDENGGEQSTVPKPDTPDSMFIFKSTNPIRRICHYVVTLRYFEMTI
LLVIVASSIALAAEDPVCASSERNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFR
DLWNILDFIVVVGALIAFALTNLMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVF
DCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSMGTQKECQGYYIDYGRD
RKEVKKREWRRHEFHYDNVLWALLTLFTVSTGEGWPQVLQHSVDVTEEDHGPSRGNRMEM
SIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECNLEKNERACIDFAISAKPLTRY
MPQNRQTLQYRLWHFVVSPSFEYTVLVMIALNTVVLMMKYHSAPAAYDLVLKHLNTAFTV
LFSLECILKIMAFGFMNYFRDTWNIFDFITVLGSISEIVVDLQSVNTINMSFLKLFRAAR
LIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDETHINQ
HNNFKTFFGALMLLFRSATGESWQEIMLSCLGGKECELDPSIVPPFISPDHEGGCGTDFA
YFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRI
HYNAMYEMLTHMSPPLGLGKKCPAKVAYKRLVLMNMPVDEDMTVHFTSTLMSLIRTALEI
KIARGGEDRLQLDMELQKEISVIWPHLSQKTLDLLVPINKDTDMTVGKIYASMMIMDYFK
QSKAKKLRQQVEAQRIAALPLISHSAGSALTSGGFVALSPISPQELLLQPMTHRTDSSED
YDASQVDESGLNGMWGEDRPPEHAFRTRHKSYKAAVSHSDQTQYMEKVRGRPKEQRFLLS
PDNSNSKSRSRSPSEERIHGVTRQGNSSESPVPSTSESSTPSGKRRLSQTSTCSRPHISY
SPLVCHTQPSSQADDDDDDPTVQQMLGCCSTALWDDGAEDQEARVRQQESTHFEVGEYLS
SSARRYPSESFLALQEEEHSPDSSTAMETLTFEAAVATSLGRANTVSASMRTRSRIGWQV
PNGHFRKRLAQSVSLAGGETLSDADDDKY
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgaatattccggtggatctgagaaccctgagggctgtgcgtgtgttaagacccctcaaa
ctagtctctggtatccccagtttacagatagttctgaagtccattatgaaagcgatggtg
cccctgctgcagattggtcttctgctgttctttgccatcctgatgttcgctatcatcggt
ctggagttttacagtggcaaattacaccacacttgcctgccctctccagatatactagat
aatgagacggtggactcttctgaggttgagtttgcttgtggagtgaggaagtgccctgat
aaatacacctgcactggctcttggattgggcccaatgatggcatcactcagtttgataac
atcttgtttgcagtactaacagtttttcagtgtattaccatggagggatggactgccgtc
ctgtacaatactaatgatgctttgggacccacatggaattggatatatttcattcctctc
atcattatcggctcattttttgtgcttaaccttgttttgggtgttctttctggggaattt
gctaaagagagagagagggtggaaaacagacgtgccttcatgaagcttagacgacagcag
caggtggagagagaactcaacggctaccgggcctggatagacagagcagaggaagtaatg
cttgcagaagaaaacaagaattctgggaggtcagcgttagatgttttgaaacgggccacc
agcaagaaaaatgcaaggcgtcgaggaccaggggaggagaaatattctgaaatctctaca
gttggtggtccccgaccaagggttggtatacgaacagcaagacgaggtcctgctgcttac
atgcggcgcaaggaacgcatgttgcgaatctctattcgtcgcatggttaaaaccgacagc
ttctattggatagtcctcagtctggtgggtctcaacaccatctgtgtttccatcgttcat
cacaatcaaccagaatggctcactgttattcagtactacgcagaattcgtgtttcttgga
ctttttcttgctgagatgttcctgaaaatgtatggccttggtttccgtctgtacttccat
tcatcttttaactgctttgattgtggggtgattgtaggaagtatttttgaagtggtttgg
ggattcttcaggcctggagtgtcttttggcatcagtgtcctcagagctttacgactgcta
cgaatctttaagataacaaagtactggtcatccttgcggaacttggtggtgtccctcatg
agctccatgaagtcaatcatcagtttgctcttcctcctcttcctgtttatcgtagtcttc
gctttacttggcatgcagctctttggtggcaggttcatttttgaagattacactcctact
aattttgacacgtttccagctgccatcatgactgtctttcagattcttactggagaagac
tggaatgaggtgatgtacaatgggatacgctcccaaggaggagtgcagtatggaatgtgg
tcctcaatatactttattgttttaaccttgtttgggaactacacattgctcaatgtattc
ttggctatcgctgtggataatctagccaatgcacaggaactaactaaggaagaagaggag
gaggaagaagagttcttcaatcagcgttataaaagcagagaatttggcctctcagaaagg
agacggagaccgtacttgtacaggaagcgtgccattcacagaggacgaccatctcctgca
gaggcagaggaggaacctgctgtcaaacaaggggaagagcagcctgtgaatgcttttgct
ggccgacgtgagagacgtaaaaaaattaacatgtccgtctgggagcaaaggacgaaccag
ctgcggaaacgtcgccagatggccagtcgtgaggtactgtttggcagtcctacagaggat
cagatggacactccagtgagtgatcatcaccaacagagctgcatgtcccctgagacaagc
cctttacacttgccagaatcaccaatgtctgtggggattcccctgccagagccacccatg
tctatcaccattcctctccctgaacctccagagtctgagccattgcccctgatgggatcg
gggctggaggagaggccaagcattaataaccaccattcaaatacagagaggaggcatcgt
gtggcaagaaagtttcgggctgctgccgctgcaggggtagcagagggtggccgacacaaa
cggcacagacatcgagagtccagaacagagagcagaaacgtagagaatcaccagcaattt
gggtgcagcgagaaacaggctgaagagggtgtggataaaatggaggaaacacagtctaaa
aacatgatgcacatgtatgaaactgaaataatgtctggcaagcaaattgagaaacaggag
gaatgccaaagggagtttgtgggtgatgtgactggacaagcagctggccttgaggagctt
cagtctgtatgtactggaatggaggatcaagcagaaagccaggaaactccatttctgagg
cacaaagaagactttacatcagactccaaatacatcactggggaagtctcagacattgag
aacaacggcagctatcttaaccaggatgagtgtataacagaaaccagcattaaacgagag
acgtcagcccagcctttgttggaaatggcaccaatgactgtcagtttcaaggatgtggag
gccagtcactcggacaaagctgatgatgacgacgatgattatgatgatgagaatggaggt
gaacagtcgactgtccccaaacctgacacaccagacagcatgttcattttcaaaagcaca
aatcctataagaaggatctgccactatgtggtgaccctgaggtactttgagatgaccatt
ctcctggtgattgtggccagcagtattgcgctagctgctgaggaccctgtgtgcgccagt
tcagagagaaataaagttctccgttactttgattatgttttcactggcgttttcacattt
gagatgattataaagatgattgaccagggcctcattcttcatgatggatcatatttccgg
gacttatggaacattctagactttattgtggtggttggagctctaattgcctttgcattg
acgaatttaatgggaaacaacaaaggcagagacataaagaccattaagtccttgcgggtt
ctcagagttcttcgccctctcaagaccatcaaaagacttccaaagctcaaggctgtgttc
gattgtgtggtcacatccctgaagaacgtcttcaacattctcatcgtctacaagctcttc
atgttcatttttgctgtcattgcagtgcagctctttaagggaaagtttttttactgtact
gatggctcaatgggcacccaaaaagaatgccagggctactacattgactatgggagggac
aggaaggaggtgaagaagagggagtggaggagacacgagttccattatgataatgtcctc
tgggctcttcttacactcttcactgtgtccacaggagagggctggccacaagttcttcaa
cactccgtggatgtcactgaagaagaccatggcccaagcagaggaaatcgaatggagatg
tccattttctatgtcgtatactttgtggtttttcccttcttttttgtcaacatctttgtt
gctctcatcatcatcacattccaggagcagggtgacaaaatgatggaggagtgcaacttg
gagaaaaacgagcgggcatgcattgactttgctatcagtgcaaaacccctaacaagatac
atgcctcagaacaggcagaccctacagtaccgattgtggcactttgtggtgtcgccatca
ttcgagtacacggttctagtcatgattgcactcaacacagtagtgctcatgatgaagtac
cactcagcaccagctgcctacgaccttgtcctgaaacaccttaacacagcgttcactgtg
ttgttctctctggaatgcatcttaaagatcatggcctttgggttcatgaactacttccgt
gatacatggaacatctttgattttatcactgtgctgggcagtatttcggaaattgtggta
gatttacagtctgtgaacaccatcaatatgagtttcctgaaacttttccgagcagctaga
ctcattaaactgttgagacaaggctacacaatacggattctgctgtggacatttgttcag
tccttcaaggctcttccatatgtttgcctcctcattgccatgcttttcttcatttatgcc
attattggcatgcaggtgtttgggaatattaaattgaatgatgaaacccacattaatcaa
cacaacaatttcaagacattctttggtgccttgatgctactctttagaagtgccactgga
gagtcttggcaagagatcatgctctcatgtctaggagggaaggagtgtgaactggaccct
tcaatagtaccacctttcatttctccagatcatgaaggcggctgtggcaccgactttgcc
tatttctattttgtttccttcatctttttcagctcatttttgatgctgaatctgtttgtg
gctgtgattatggacaactttgagtatttgacacgagactcatccattcttggacctcat
catctggatgagtttgtgcgcatctggggggaatatgaccgagcagcatgtggccgtatt
cactacaatgccatgtatgagatgctaacccacatgtctccacctcttggattgggaaag
aagtgtcctgccaaagttgcctacaagagactggtgctgatgaatatgccagttgatgag
gacatgacggttcacttcacatccactctgatgtctctgatccgtactgctctggagata
aaaattgctagagggggcgaggaccggctacagttggacatggaattgcagaaggagata
agtgtcatctggccacacctgtcccaaaagactctggatctgctggtacccatcaacaaa
gacacagacatgacagttggaaagatttatgcttctatgatgatcatggattactttaag
cagagcaaagctaagaagctgaggcaacaggtggaggcccagagaattgccgccctgccc
ctgatctctcacagcgcaggatcagccctgaccagtggaggttttgtggctttaagccca
atatcaccacaggagctgttattgcagcctatgacccatcgtacagacagcagtgaagac
tacgatgcctctcaggttgatgaatcagggttgaatggcatgtggggggaagatcgccca
cctgaacatgcattcagaaccagacacaagagctacaaagctgcagtgtcccactcagac
cagacacagtacatggaaaaggtgcggggacggccaaaagaacaacggttcttactgtcc
ccagataactcgaactcaaaatcccgttcccgctctcccagtgaggagcgcatacatggg
gtcaccagacagggaaacagctcagagagccccgttccctccacctcagagtccagcacg
ccgagtggtaaacgtcgcctgtcccagacctccacctgctcccgccctcacatctcctac
tcacccttagtgtgccatacgcagccttcatcacaggctgatgatgacgacgatgaccca
actgtccagcagatgttaggatgctgtagtactgctttatgggatgacggcgctgaagat
caggaagcgagggtgagacaacaggaaagcacccatttcgaagtgggtgaatatctgagt
tcatctgcccgccgctatccttctgaatccttccttgccctacaagaggaagaacacagc
cccgattcttccaccgctatggaaactctcacctttgaggcagcggtggccaccagcctg
ggccgagcaaacacggtcagcgcctcgatgcgcacaaggtcaaggataggctggcaggtg
cccaacggacacttccggaagagattggcacaaagcgtatctctcgccggcggtgaaact
ctcagcgatgcagacgacgacaaatactag
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