Megalobrama amblycephala (Wuchang bream): 125250703
Help
Entry
125250703 CDS
T08212
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125250703 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125250703 (prpf38b)
Spliceosome [BR:
mamb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125250703 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
125250703
NCBI-ProteinID:
XP_048019389
LinkDB
All DBs
Position
LG17:complement(9282992..9290361)
Genome browser
AA seq
495 aa
AA seq
DB search
MAVSQQQQQQQAVSKPAGGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPPDLIDWYDEFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMKSRPRKPPQRDEQEEEEAATATDSTRHGD
RRRSRTPKRSPSPRRSQNRSRSRSHHKERHGASFDRELERERDRQRKEREGKDRDRDRDR
ERDRERDRDRRRSRTPDRTTERRRSRSRERRRSHSASREKRNERKERDKEREAESERERS
RRKDRDHHKDRERSKDKRSKGEGEERRHKEDKEDRKHREEKRSKRSRSRSRDRKHKTERS
SKKRSRSGSRSRQEAGEEKNRKRERSHSKERSHKRSRSKERTHRRESSNGREHVKQDRHS
PEPGERTNNVRAESP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcagcagcaacaacagcagcaggccgtgagcaaacctgccggcgggaaa
cacggcaacgttttgccgttatggggcaacgagaaaaccatgaacctcaacccgatgatc
ctgacgaacgtcctgtcgtcgccctacttcaaggtccaactgtacgagctcaagacgtac
cacgaggtggttgacgagatctacttcaaggtcacccatgtggagccatgggaaaaaggc
agcaggaagactgcggggcagacgggaatgtgcggaggggttcgtggagtcgggacggga
gggatcgtgtccactgcgttttgtttgctgtataaactatttacactgaaactgacccgc
aaacaagtgatgggtctcatcactcacacagattcgccctatatcagggcactgggcttc
atgtacatcaggtatactcaacctcctcctgacttgattgactggtatgatgagttcctt
gacgacgaggaggagttggacgtgaaggctggaggaggatgtgtaatgactgttggagag
atgctccgctccttcttgaccaagctggaatggttctcaacattgttcccacgaatacct
gttcctgtgcagaaggcaatcgaccagcacatgaagagccgaccacgtaaacccccgcaa
agagatgagcaggaggaggaggaggcggcaacggcaaccgattcaacaaggcatggagat
aggcgccgttccaggacacctaagagaagtccgagtcccaggagatcccaaaatcgttcc
cggagtcgcagccatcacaaagaaagacatggcgcaagcttcgaccgtgaattggagaga
gaacgagatcgtcagcgcaaagaaagggagggaaaggaccgggatagagacagggaccga
gagagagacagggagagagaccgagatagacgacgttccagaacaccagaccgaaccaca
gaacgtcgacgcagccgtagcagggaacgacgccggagtcacagtgccagccgggagaag
cggaatgagaggaaagaacgagataaagagagggaggcagagagcgagagagagcgtagc
cgcaggaaagacagagatcatcataaagatcgggagaggtcaaaagacaagagaagtaag
ggagagggagaagagaggaggcacaaagaagataaggaggatagaaagcacagggaggaa
aagaggagtaagcgctcaaggagcagaagcagagacaggaaacacaaaaccgagcgatct
agcaagaaacgctctcgctcaggcagcaggagcaggcaggaagccggggaggagaagaac
aggaagcgggaacgcagccatagtaaggaacggtcacacaagcgcagtcgcagcaaagag
cgtacacaccgtagagaatccagcaatggacgagaacatgtaaaacaagatcgccacagt
cccgaaccaggtgaaagaacaaacaatgttcgagcggagtctccctga
DBGET
integrated database retrieval system
