Megalobrama amblycephala (Wuchang bream): 125251156
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Entry
125251156 CDS
T08212
Symbol
cdh12a
Name
(RefSeq) cadherin-12a
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125251156 (cdh12a)
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Major cadherins
125251156 (cdh12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_2
Cadherin_CELSR2_9th
Stevor
7TM_GPCR_Srw
RIFIN
Spore_permease
Motif
Other DBs
NCBI-GeneID:
125251156
NCBI-ProteinID:
XP_048020066
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All DBs
Position
LG17:33766383..33817875
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AA seq
802 aa
AA seq
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MLMGNCLLLFLWCLLDKSFVFPLHSSSQSRMGKEQHRNLMAHRKHGMMGVHRVKRGWVWN
QFFVLEEYMGSDPQYVGKLHSDLDKGDSMVKYTLSGEGVGSIFTIEPSTGDIHALRSLDR
EEKPFYTLRAQAVDVFTGRPLEPESEFIIKVQDINDNEPRFLEGPYSASVPEMSPVGTYV
TQITATDADDPTYGNSARIVYSILHGQPYFSVDPKTGVIRVALPNMDREVKEMYQVAIQA
KDMGGQLGGLAGTTTINITLRDVNDNPPRFSKSIFHLRVLESSPVGSSVGRVKAHDLDSG
KNAEVEYSIVPGDGGSMFDIYSNKDTQEGTVILKKRLDYETRKAYTFKVEASNAVLDHRF
IHLGPFKDTATVKVNVLDVEEPPVFSRLSYRMETYEDTPVGIIVGAITAEDLDVGNSPVR
YSIEWRKDSENHFDIDPVEGTLSVSEGLDRERNAEHNVTVVATKVNNPLLSSKVTVTIKV
LDVNEFPPELAFVYETFVCENAKVGQVIQIISATDKDMPAVEHRFYFKTPSQTRNRNFTI
RDYGNNTAGVVTRRGGFRRLEQSMYLVPVVVEDSGYPIRSSTGTVSVRVCTCDTDGSLLS
CNAEAVFFPMGLSTGALMAILLCIVILLVMVMLYMGLRKHKKKDTLMSSKEDVRDNVIHY
DDEGGGEEDTQAFDIGTLRNPKGIKETAQLQKIRSEDEPDRASACVSNEDSEDIRAYIHH
CLLENSTPPYDSLVTYAYEGEGSVAESLSSIESWVLEPKEDYRNLCDWGPRFKTLAGIFK
EHEAMEKVENEAHAEALKDRVD
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggggaactgtctgctgctcttcctctggtgcctcttagacaaaagttttgtt
ttccccctccattcttcatcccagagcaggatggggaaggagcagcacaggaacctaatg
gcacataggaaacatggcatgatgggagttcacagagtcaagaggggatgggtgtggaac
cagttctttgttctagaggaatacatgggatctgatccacagtatgttggaaagcttcac
tctgacctggataagggagatagtatggtgaaatacacactctcaggtgaaggagttggc
tctattttcaccatcgagccaagcaccggagacatccatgccttaaggagcctggaccga
gaagagaagcctttttacacactgagagcgcaggctgtggacgtgttcacaggcagaccc
ttagagcccgagtcagagtttattatcaaagtccaggacatcaatgacaatgagccaagg
ttcctggagggcccatactcggccagcgtcccagagatgtcacccgtcggcacatatgtg
acgcaaataaccgccactgatgctgatgaccccacttatggaaacagcgcgcggattgtg
tacagcatccttcatgggcagccctacttctctgttgaccccaagacaggggtcataaga
gttgccttacccaatatggatagggaggttaaagaaatgtaccaggtggccatacaggct
aaggacatgggcggtcagcttgggggtttagccgggaccactaccatcaatatcactctc
cgtgatgtcaacgacaacccaccgcggttttctaaaagtatctttcacttgcgtgttctt
gaatcttcgcctgttggctcatcggtgggaagggtcaaagctcatgatctggactctggg
aagaatgctgaagtggaatatagcatcgttcctggtgacgggggctccatgtttgatatt
tacagcaataaggacacacaagaaggaacagtcatactcaaaaagcgtctggactatgaa
accagaaaggcctacacctttaaagtggaagcttcaaacgcagttcttgatcatagattc
atacacttgggaccttttaaggacactgccacagtgaaagtgaatgttctggatgtggag
gagcctcctgtcttcagccggctgtcttatagaatggagacatacgaggacacaccagtg
ggcatcatcgtcggagccatcacagctgaggacctagatgtaggcaacagtcctgttaga
tattctattgagtggagaaaggactctgaaaaccactttgacattgaccctgttgaagga
actctgtctgtcagtgaaggcctggacagagagagaaacgctgaacacaacgtcactgtt
gtagcaacaaaagttaacaaccccctgctgtccagcaaagttactgtcacaatcaaggtg
ctggatgtcaatgagtttcctccagaacttgcctttgtgtatgagacgtttgtttgtgaa
aatgcaaaagtaggacaggtgattcagatcatcagcgccacagacaaagacatgccagct
gtagagcaccgattctacttcaaaaccccttcacagaccaggaacagaaacttcacaatc
agggactatggaaacaacacagctggagtggtgaccaggcgaggggggtttcgaagacta
gagcagagcatgtacctggtgccagttgtcgtggaggacagcggttacccgatccgaagt
agcacagggacggtgtctgtgcgggtgtgtacctgcgacacagacggctccctcctttcc
tgcaatgcggaagccgtcttctttcccatgggactcagcactggagctctgatggccata
ctgctgtgcattgtcattctgctggtgatggtgatgctctatatgggcctgagaaaacac
aagaagaaagacactctgatgtcgtccaaagaggacgtccgggacaatgtgatccactac
gacgatgaggggggcggggaagaggacacccaggccttcgacataggtacgttacgcaat
cccaaaggcatcaaagagacggcgcagctgcaaaaaataagatcagaggatgagcctgat
cgggctagtgcgtgcgtgtctaacgaggacagcgaggacatcagagcctacatccatcat
tgtcttctagagaactccacacctccgtatgactctttggttacatatgcatatgaggga
gaaggttcggtggcagagtccctcagttccattgagtcttgggttctcgaacccaaggag
gattacagaaatctatgtgactggggtcctcgtttcaaaactctggctgggatatttaaa
gagcatgaggctatggaaaaggtggaaaacgaagcacatgctgaggcactaaaggacaga
gtggactga
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