Megalobrama amblycephala (Wuchang bream): 125251275
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Entry
125251275 CDS
T08212
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mamb03032
]
125251275 (pif1)
03029 Mitochondrial biogenesis [BR:
mamb03029
]
125251275 (pif1)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125251275 (pif1)
DNA replication proteins [BR:
mamb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125251275 (pif1)
Mitochondrial biogenesis [BR:
mamb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
125251275 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
DEAD
Herpes_Helicase
UvrD_C_2
Mg_chelatase
RsgA_GTPase
AAA_7
AAA_16
AAA_5
ABC_tran
PhoH
Motif
Other DBs
NCBI-GeneID:
125251275
NCBI-ProteinID:
XP_048020210
LinkDB
All DBs
Position
LG17:complement(26391215..26402895)
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AA seq
639 aa
AA seq
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MLGHIDPAELQCTVAVERLNPAGQAIKRQLIRKATVTLGRNEFQEMVLRVHDGKAPQNFM
LRDFQLFTRFAKDGKCTVKFVPESTQVLVSDCPPDRLKVFLKTLSIKHQASQSNKPMSDR
AKLRAGLPRAFESVSPLQLKDVQKANELRSKVNAPIQPKGPSERSVNKGFGERKQVKRPR
PDCDASPVKALHPNKKPVLVLPVAQKLSKEQTAVLNAVLSGKNVFFTGSAGTGKSFLLKR
IVGSLPPKSTYATASTGVAACHIGGTTLHSFAGIGSGSAPLEQCLELAQRPGVLQHWTSC
KHLIIDEISMVEAEFFDKLEAIARSIRRSTEPFGGIQLIVCGDFLQLPPVTKGKDKANFC
FQSRSWRKCIHMNMELTEVRRQTDKAFISLLQAVRVGRVTEEVTVKLLRSANHCIERDGI
LATRLCTHKDDVELTNENKLKQLPGAVRIFEAVDSDPMLVQTIDAQSPVSRLLQLKVGAQ
VMLTKNLDVQRGLVNGARGVVVDFQPGNQGLPRVRFLCGAVEVMKRERWMFKASGGLYLS
RQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDFDPRV
VQANQDVLLFYKRLRKERLLMQSSMNDFVGQSNKENYPW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttgggacacattgatcccgctgagcttcagtgcaccgtggcagtggagcgcttgaat
cctgcaggtcaggccatcaaacggcagctcatccgcaaagccaccgtcacattggggcgt
aacgagtttcaggagatggtcctgcgcgtccatgatggcaaagcacctcagaacttcatg
ctgcgcgatttccagctctttacgcgcttcgcaaaggatgggaaatgtactgttaaattc
gtcccggagagcacacaggttctagtctctgactgtccaccggatcgtttgaaggtgttt
ctcaagacgctcagcatcaaacatcaagcatcccagagcaacaagcctatgagtgaccgg
gctaaactacgagccggcctccctagagctttcgagagcgtcagtcctctccagctgaaa
gatgtgcagaaagcaaacgagctcagaagtaaagtgaacgccccaatccaacccaaagga
ccttcagagagatctgtcaataagggctttggtgaaaggaaacaagtgaaaagacccaga
cctgattgtgacgctagtccggttaaggcgcttcaccccaataagaagcctgtcttggtt
ctgcctgtggcacaaaagctaagcaaagagcaaactgctgttctcaatgcagtcttgagt
ggcaagaatgtgtttttcacaggcagtgcaggtacagggaagtccttcttgctcaaaagg
attgtaggctctctgcctccaaaaagcacatatgcaacagcgagcactggtgtcgcagcc
tgtcacataggagggaccacactgcacagttttgcaggtattgggtccggctctgctcct
cttgaacagtgtcttgagctcgctcagcgtccgggggtgctgcagcactggacctcctgc
aaacaccttattattgatgagatctcaatggtggaggccgagttctttgacaaactggaa
gccatagccaggtccatcagaagatcaactgagccatttggagggattcagctgattgtg
tgcggagactttcttcaacttccacctgtaacaaaaggaaaggacaaagctaacttttgt
ttccagtcgagaagctggcggaagtgtatccatatgaacatggagctgacggaggtgcgc
agacaaacagacaaagccttcatttctctcctccaggctgtgagagtgggcagagtcaca
gaggaagttaccgtgaagctactgagaagtgccaatcactgcatcgaaagggatggtatc
ctagcaaccaggctgtgcacacacaaggatgatgtggagctcacaaatgagaataaactc
aaacagttgccaggggccgtgcgaatattcgaagctgtggatagtgaccctatgctagtt
cagaccattgacgcacagagtccagtgagtcggctgttacagctgaaagtgggcgctcag
gtcatgcttactaaaaacctggatgtccagagaggtctagtgaatggagccagaggagta
gttgttgactttcagccgggcaatcaaggtctccctcgggtgcgattcctctgcggggct
gttgaggtaatgaagagagagcgttggatgtttaaagcgtcaggggggctatacctgagc
cgacagcagctgccactcaaactggcctgggccatttcaatccacaagagtcagggcatg
actttggattgtgtggagatctctttggcgcgtgtgtttgagagtggccaggcctatgtt
gctctgtcacgtgctcggagtctggaaggcctgcgtgtgatggactttgatcctcgagtg
gtgcaggccaaccaggacgtgctgctcttttataagagactgaggaaggagaggctccta
atgcagtcctcaatgaatgactttgttggacagagcaataaggagaattacccttggtga
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