Megalobrama amblycephala (Wuchang bream): 125251304
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Entry
125251304 CDS
T08212
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125251304 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125251304 (smarcd3a)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125251304 (smarcd3a)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125251304 (smarcd3a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125251304 (smarcd3a)
PBAF complex
125251304 (smarcd3a)
GBAF(ncBAF) complex
125251304 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125251304
NCBI-ProteinID:
XP_048020242
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All DBs
Position
LG17:complement(36209379..36235053)
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AA seq
552 aa
AA seq
DB search
MDMEDSAGGARKATKSKLFEFLVHGVRPGMTSGARMPHQGAPMGPPGPPYGGTPPIRPGM
PNPALDPNRKRPAPTQPVQPPPVQNRPRKKPLGFPATNEISARQMDMREAQSDPAIGSNA
KRRKMADKILPQRVRSIIVAFICLSVFVYSSLNFQRQVKSDCTVQIRELVPESQAYMDLL
AFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSEGSIASWELRV
EGKLLDDPGKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDV
NVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHEKEYIN
CDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDPIVINHVIRRSLCDAPKRTKSIISVDPND
QKKTACYDIDVEVDDPLKSQMNGFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLS
FSRDPKGYIQDWICSQNRDLKLMTDTVGNPEEERRAEFYNQPWSQEAVSRYFYCKIQQRR
QELEQALAMRTT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaggattctgccggaggagctcgtaaagccaccaagagtaaactgtttgag
tttctcgtccatggagtgcgtccggggatgacttcaggggcacggatgccccatcaagga
gctcccatggggcctcctggacctccatatggaggaacaccgccaattcgaccagggatg
cctaacccagccctagaccccaaccgaaaacgccccgccccgacccagcccgtgcaacct
ccccctgtccagaaccgtcccagaaagaaaccacttggatttccagcaacaaatgagata
tctgcgagacagatggacatgagagaagcccagtcagatcctgcaattggatccaatgcc
aagagaagaaaaatggcagacaagattctccctcagagggtgaggtccatcattgtggct
tttatttgtttgtctgtgtttgtttattcatctcttaattttcagcgccaagtcaagagt
gattgcacggtacagatccgtgaactggtgccagagtcccaggcgtacatggacctcctg
gcttttgagcgcaaacttgaccaaaccattatgaggaagagggtggatatacaggaagcc
ctcaaaagaccaatgaagcaaaagcggaagctacgcttgtacatttcgaacactttcaac
cctgccaaacctgatgcagaggactctgagggcagcattgcatcatgggagctgcgtgta
gagggcaagttattggatgatcctggaaaacaaaagaggaagttttcgtctttctttaaa
agccttgttattgagctggacaaggatctgtacggccctgataaccacttagtggagtgg
caccgcacccctacaacccaagagacagacggcttccaggtgaagaggcccggtgatgtg
aatgtgcgctgtaccctcttgctcatgctggattaccagcctcctcagtttaagttggat
cctcgcctcgcacgtctccttggcatccacactcaaacccgctcctgcatcatccaggca
ttatggcagtacgtcaagaccaacaagctgcaggattctcatgaaaaggagtacatcaac
tgtgataaatatttccagcagatcttcgactgtcctcgtctaaagttctgtgagatccct
cagcgactaaccaacctgctgctgccgcctgatcctattgtgatcaatcatgttatcaga
agatcattgtgtgacgctccaaaaaggacaaaaagcattataagtgtggatccaaatgac
cagaagaagacagcctgctatgacattgatgttgaagttgatgatccccttaagagtcag
atgaatggattcctgctgtccacagccaatcaacaagagattgcatccctagacaacaag
atccatgaaactatcgagtccatcaaccaacttaagatccaaagagatttcatgcttagc
ttctccagagaccccaagggctacatccaggactggatctgctcccagaaccgggatctt
aagctgatgacggatacagttggaaatccagaggaagagaggagagcggagttttataac
cagccctggtctcaggaagctgtcagtcgctatttctattgcaagattcaacaacgaaga
caggagcttgaacaggctttagcaatgcgaaccacttaa
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