KEGG   Megalobrama amblycephala (Wuchang bream): 125251390
Entry
125251390         CDS       T08212                                 
Symbol
wdr48b
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    125251390 (wdr48b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mamb03400]
    125251390 (wdr48b)
DNA repair and recombination proteins [BR:mamb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     125251390 (wdr48b)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_SCAP NBCH_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Vps41 WDR54 WD40_RFWD3 WD_LRWD1 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 WD40_like Tfb2_C RAWUL
Other DBs
NCBI-GeneID: 125251390
NCBI-ProteinID: XP_048020338
LinkDB
Position
LG17:6878623..6890485
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIVRIWSVN
QHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQAG
TVIISGSTEKVLRVWDPRTCAKLMKLKGHSDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDKSADPPQAIWVSTTKSFVNKWSLKGMHNFRTSGDYDNDCSAPLTPLCTQPEQVIKGG
TSIVQCHILNDKRHILTKDSNNSVAFWDVLKACKGEDLGKVDFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDSFAAWVAAKDAGFTSPDGSDPKLNLGGLLLQALLEFWPRTHIN
PMEEEENELNHVNGEQESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDTESQTTSSSANDKPGEQEKEDDVAVMAEEKIELMCLDQVLDPNMDLRTVKHF
IWKSGGDLTLHYKQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgactcatcacagacagaacgctgctggacggaggaaagtccaggtttcctacgtt
attagagatgaggtggagaagtacaatcgtaacggtgtgaacgctcttcagctggatcct
gctctcaacagactctttacggccggacgagactccatcgttaggatatggagtgtcaac
caacacaaacaggatccgtacatcgcttcgatggagcatcacactgactgggtgaatgac
atcatcctctgctgtaatggaaaaacattgatatcagcctcctcggacaccactgtgaaa
gtctggaatgcacacaagggattctgtatgtccacgttacggacacataaggactatgtc
aaagctttagcatatgcgaaagacaaggagctggtggcatcagccgggctggacaggcag
atcttcctgtgggatgtgaacacgctgaccgctctgaccgcctctaataatacagtcacc
acttcttcattgagtggaaacaaggactccatctacagtctggccatgaatcaggcagga
accgtgatcatctcaggatctacagaaaaggtcttgagggtctgggatccacgaacatgt
gccaagctaatgaagctgaaaggccacagtgacaacgtcaaatcattattactaaacaga
gacggcactcagtgtctctctggtagctcagacggtacaatacgcttgtggtctctcggc
cagcagcgatgtatcgccacataccgggtccacgatgagggtgtgtgggccttgcaggtg
aacgaggccttcacgcacatttactccggtggacgtgaccgaaaaatctactgtactgac
ctgcgaaaccctgacatacgtgtgctcatatgtgaagagaaagctcctgtcctaaagatg
gaattggacaaatcagccgaccctcctcaagccatttgggtgtccacaactaaatcattt
gtgaacaaatggtctctaaagggcatgcataacttcagaacatctggagactatgacaac
gactgtagtgccccactgactcctctgtgtacacagccagagcaggtcatcaaaggtggc
accagcatcgttcagtgtcatattctcaatgacaagaggcacatactcactaaagacagc
aataacagtgtggcattctgggatgtcctaaaggcatgcaagggggaagacctgggtaaa
gtggactttgatgaggaaattaaaaaaaggttcaagatggtttatgtgccgaactggttt
tctgtagatctcaaaacagggatgctgactatcacgctggatgaaagcgattcctttgcg
gcgtgggtggcagctaaagatgctggttttacaagcccagatggctctgaccctaagttg
aatctgggtgggctgctcctgcaggccctgttggaattctggcccagaactcacataaat
ccaatggaagaggaggaaaatgaactcaatcatgtaaacggtgaacaggagagccgaatt
caaaagggcaacggctacttccaggttcccccacacactcctgtcatctttggtgaagca
ggcggaaggacgttgtttaggttattatgccgtgattctgggggagagacagagtctatg
ttactgaatgaaactgtacctcagtgggttattgatatcactgtagataaaaacatgcca
aaattcaacaagatcccattctacctccaacctcattcatcatctggagccaaaacactc
aaaaaagaccgtctgtctgcgagtgacatgcttcaggtgcggaaagtgatggaacacgtc
tatgagaagatcatcaaccttgacacggagtcacagaccaccagctcttcagccaatgac
aagccaggagagcaggagaaagaagacgacgtggcagtgatggccgaagagaagattgag
ctcatgtgtttagatcaggttttggatccaaacatggacctccggactgttaagcatttt
atctggaagagcggtggagacctgacccttcattataaacagaaatccacgtga

DBGET integrated database retrieval system