Megalobrama amblycephala (Wuchang bream): 125251401
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Entry
125251401 CDS
T08212
Symbol
viml
Name
(RefSeq) vimentin like
KO
K07606
vimentin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125251401 (viml)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125251401 (viml)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125251401 (viml)
04147 Exosome [BR:
mamb04147
]
125251401 (viml)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125251401 (viml)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
125251401 (viml)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125251401 (viml)
Exosomal proteins of other cancer cells
125251401 (viml)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF7491
Laminin_II
TolA_bind_tri
TPR_MLP1_2
BLOC1_2
KASH_CCD
Trimer_CC
GAS
Motif
Other DBs
NCBI-GeneID:
125251401
NCBI-ProteinID:
XP_048020355
LinkDB
All DBs
Position
LG17:7305108..7316653
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AA seq
446 aa
AA seq
DB search
MSTSSYRKRFGDVSRSSGFSSRQTSSLMRSQVSFGVSSAPVIYASKSSKLRSSAAMPRLS
SETVDFNLSDALNKEFKVNRLNEKAQMQSLNDRFASYIEKVRFLEQQNKILCAELEQLRG
QRSSSIADLYEEEMRDLRRQVDQLTTEKAHVEVARDNMAEDIERLREKLQNEILQREDAE
NSMRSFRQDVDSAALARVDLERKVESLQDEIAFLKKLHDEELAELQAQIQGQQVQVDMDI
AKPDLTAALRDVRLQYENLASKNIQESEDWYKSKFADLTEAANKNNEALRLAKQEANEYR
RQVQALTCEVEALKGTNESLERQMREMEENFGMESSSFQDNISRLEEDIRNMKDEMSRHL
REYQDLLNVKMALDIEIATYRKLLEGEESRITTPLPNFPSFSLREAMLESKPVTENIITK
KVLIKTIETRDGQVINESTQNHDDLE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctcctcgtacagaaagcgatttggagatgtgagccggagcagcgggttctcc
agccgccagacgtccagtctcatgcgctcacaggtgtctttcggcgtctcctcggctccg
gttatttacgcgtcgaagagctccaaactccgaagtagcgcggcgatgccacgactgagc
tctgagactgttgattttaatctctcggatgccttaaataaggaattcaaggtgaatcgt
ctcaatgaaaaggcgcagatgcagtcactaaacgaccgcttcgccagttacatcgagaag
gtgcgtttcctggagcagcagaacaagatcctgtgcgcggagctggagcagctgcggggt
cagagatcttccagcatcgctgatctctatgaggaggagatgcgagacttgaggcgacag
gtggaccagctcaccacggagaaagcacacgtggaagtggcgcgagacaacatggcagaa
gatatagagcgactcagagagaaactgcagaatgagattctgcagcgagaagatgcagag
aacagcatgaggagtttcagacaggatgtggacagcgctgctcttgctcgagtggatctg
gagaggaaggtggagtctctccaggatgaaattgccttcctgaaaaagctccacgatgag
gagctggctgagctgcaggcacagatccagggccagcaggtgcaggtggatatggacatt
gctaaacctgatctgacagctgctctgagagacgtcagactgcagtatgagaacctggca
tccaaaaacatccaggagtcagaggattggtacaaatccaagtttgctgacctgactgaa
gcggctaacaagaataatgaagctctacgattggccaagcaggaggccaatgaataccgc
cgacaggtgcaggcgctcacctgcgaggtggaagcactcaagggaacaaatgaatctctg
gagcgtcagatgagggagatggaggagaactttggaatggagtcttctagtttccaggat
aacatctctcggctggaggaggacatacggaacatgaaggacgagatgtcaagacacctg
cgtgagtatcaggatttgctcaatgtcaagatggccctggacatcgagatcgccacctac
aggaaacttctagagggggaggagagcagaattacaacccctcttccaaatttcccctcc
ttcagtctgagagaagcgatgctcgagtccaagcctgttactgaaaatataattactaag
aaagttcttattaagaccattgagaccagagatggccaggtgatcaatgagtccactcag
aaccacgatgatctggagtga
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