Megalobrama amblycephala (Wuchang bream): 125251473
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Entry
125251473 CDS
T08212
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125251473 (sbno2a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125251473 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
GAS
Motif
Other DBs
NCBI-GeneID:
125251473
NCBI-ProteinID:
XP_048020450
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All DBs
Position
LG17:1957903..1990713
Genome browser
AA seq
1581 aa
AA seq
DB search
MPILATSVVMDTEDYLHPEDPQLGSPKFIAPSPPLPSSMENQLYPSNSWAYSQQTQYNQH
YPMQSGRQLQPNPSSVNLDLSDIDFHDLVRNGDFSQDLSCIDELSNTSLFSSPSESLSEY
PDPSGFGTDSLAQLPAEGTAAQMCWGIPGQSQRQQNLSAFPARFDDISVILSAPVAGFKP
VPPPPPPEEEEEADEEETEELGHVDTYAEYKPSKSTIGISHPDIVVETNTLSSVPPPDIT
YTLSISDITINSGLLSALQLEAIIYACQQHEVILQNGQRAGFLIGDGAGVGKGRTVAGII
LENFLKGRKRALWFSVSNDLKYDAERDLKDIDAPNIPVFALNKIKYGDTATSEGVLFATY
SALIGESQAGGQHRTRLKQILDWCKPNFDGVIVFDECHKAKNATSTKMGKAVLDLQSKLP
LARVVYASATGASEPKNMIYMSRLGIWGQGTPFKTFDDFLHAIEKRGVGAMEIVAMDMKV
SGMYIARQLSFSGVSFRIEEITLDEEFKLVYNKAARLWAEALELFTRAADTLGLASRKSL
WGQFWSSHQRFFKYLCIAAKVRRLVELAHNEMQHGKCIVIGLQSTGEARTREVLDENDGH
LDRFVSAAEGVFQSLVQKHFPTQKPKREKSAASKRKRKPRGRTSKFPKHCVEVGGVIKIS
DDSDSDSDEIDSESNSSPESLQDNDDVIFVNHINGPAARLEELKQRLLGKIAELGKELPL
NTLDELIDRFGGPEKVSEMTGRKGRVVRRPDGSVRYETRAEQGLTIDHVNVREKERFMTG
EKLIAIISEAASSGISLQADKRVQNRRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPE
YIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDKITK
AILGHIDNKVSPPKGYPGGDIMFFRDMKKGMIDVGIFCREPRLSLNTEKDCTITKFLNRI
LGLEVHQQNSLFQYFTDNFDYLINKDKREGKYDMGILDLAPGNDEIHEETQEKFLTPGNP
QEGQVILYKISVDRGMPWEEACSKAEKLAGEYEGFYLSNKLRGSQPCVLLAEQGRGRNLI
LYKPNIGKQAHPENLDNLLLRYYKVTPDEAKDFWKSQFDFSFRNCTHANWKGKCKQIEEG
HECFLGMRLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKQNSKQVGIKIPEN
CVSRVRAELSRMDEEVKKARREREQLAKERLNQEMLAKMIHARKLIANPPRSLPNHLHYP
RSLLAPAVQPKPEAVSEVLDLTISPCPSPDIKPPASDLNGVSLNGAMLTGRGRPCAVVPE
TYNLEELISQERQRHSQVPLNLNMRVPSSHAALNIPQQHVHTLKNHSSFGVLTQQQQQQQ
SGSHAQSSAQYSALLSQLQRGHDKSLVLQLLNQMQRQTVTPVQSPHVPLHQNSQRMPHTS
NSHAQLSKRQPQPLESHVTQPARERANDDFTFDDLDFGYPSPDSQLKYPFTSQALPSSTP
PPPPYSSSLFASAPTNSSLSDSSSSSSHFTPSSSSSEQTHLLPNGHSSMDPLDTLDHMIH
GTPSDLRQSVIQFKSVDWDAT
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcttgccacgtctgttgtcatggacacggaggactatctgcaccctgaggac
cctcagctggggagcccgaagttcattgctcccagtcctcctctcccaagttccatggag
aatcagctgtatccgtctaactcatgggcatactcacagcaaactcaatacaaccagcac
tatcctatgcaatctgggaggcagctccagccgaacccgtcctctgtgaatctggacctg
tctgatatagactttcatgacctcgtacggaacggagacttctcccaggatctgtcgtgc
atagacgagctgtccaacacatctctgttctcctcaccatctgaatcactgtcggagtat
ccagacccttcaggatttggcactgatagcctggcacagttacccgctgagggcaccgcg
gcacagatgtgctggggtatacctggacagagtcagagacagcagaacctgagcgcgttt
cctgctaggttcgatgatatcagcgtgatcctgtcagcgccagtggccggttttaagcct
gttcctccgccgccaccaccagaggaagaggaggaggcagacgaggaagagacggaggag
ttggggcacgtggacacgtacgccgaatacaagccatccaaatctactattggaatctct
caccctgacatcgtagtggagaccaacacactgtccagcgttcctcctcctgacatcacc
tacacactgtccatttcagacatcaccattaactctggcctgctgtccgccctgcagctg
gaggccatcatctacgcctgccagcaacacgaggtgattcttcagaacggtcagagagcg
ggttttctgatcggagacggggctggtgtcgggaagggccgtactgttgctggaatcata
ctggagaattttttaaagggaagaaagagagcactatggttcagtgtgtcaaatgatctg
aagtatgatgctgagagagatctcaaggacatagacgctcccaacatccccgtgtttgct
ttaaataagattaaatacggagatacggctacctcagagggcgttcttttcgccacatac
tcagcgttgattggagagagccaggccggcgggcagcaccgcaccagactcaaacagatc
ctggactggtgcaaacccaactttgatggagtcattgtgtttgatgagtgccataaggct
aaaaatgcgacctccaccaagatgggtaaagccgtcctggatttgcagagcaaactgccc
ctggcgagagtagtgtatgccagtgccacaggtgcttctgagccaaagaatatgatatac
atgagccgactgggtatctgggggcaaggaacaccattcaagacctttgacgacttcctg
catgcgattgagaagaggggtgttggtgccatggagattgtagctatggatatgaaagtg
agcggcatgtatatcgcacggcagctgagcttttccggcgtgtccttccgtatagaggag
attacactggacgaagagtttaaactggtctacaacaaagcagctagactgtgggctgag
gctctcgagctgttcaccagagcagcagacacgctgggtctggcctcccggaagtctcta
tggggtcagttctggtcgtcacaccagaggttttttaagtacctctgcatcgccgctaaa
gtccgtcgtctggttgagctcgctcataatgagatgcagcacggcaagtgcatcgtgatt
ggcctgcagtccactggagaggctcgtactcgagaggtcctggacgagaacgatggacac
ctggacagattcgtctccgctgctgagggcgttttccagtcattagttcagaaacacttc
ccaacacagaaacccaaaagagagaaaagtgcagcaagcaagaggaaacgaaagcccaga
ggccggacttcaaaatttccaaagcactgtgtggaagtgggcggggttattaaaatcagc
gatgattcagactctgactcagatgagattgacagcgaatcgaactcctcccctgaatca
ctacaggacaatgatgatgtgattttcgtgaaccacatcaacggacctgctgctagacta
gaagaactcaagcagaggctgctgggtaaaatagcagagctggggaaagagctgccactc
aacactcttgatgagctgattgacaggtttggaggaccagagaaggtgtcagagatgaca
ggccgaaagggtcgtgtagtgaggcgtcctgatggcagcgtacgatatgagaccagagca
gaacagggcctgactatcgaccatgtcaacgtcagagagaaagagcgattcatgacagga
gaaaagctgatagccatcatctctgaagcggctagctcgggtatttctctacaggcggat
aaacgtgtgcagaaccgcaggagaagagttcacatgaccttagagctgccgtggagcgcg
gaccgcgccatccagcagttcggtcgaacacatcgctcaaatcaggttacagctccagag
tacatcttcctcatctcagagctggctggagagagacgcttcgcctcgatcgtcgccaag
agattggagagcctgggggcgctgacacacggggaccgacgagccactgaatccagagac
ctgagccagtacaactttgagaacaaatatggcaccaaagcattggataagatcactaaa
gccatcctcgggcacatcgacaacaaagtctctccaccaaagggctacccaggaggtgac
atcatgttcttcagagatatgaagaaaggcatgattgatgtgggaatcttctgtagggag
ccgcgtctgagtctaaatacagagaaagactgcactatcactaagtttctgaaccgtatt
ttgggtttggaggtccatcagcagaactctctgttccagtacttcaccgataactttgac
tacctgatcaacaaggacaaaagagagggaaaatatgacatgggcatattggatctggct
ccgggtaatgatgagattcacgaggaaacacaggagaagtttctgactccaggaaaccct
caggaaggccaggtcatcctctataagatcagtgtggatcgtgggatgccctgggaagag
gcttgcagtaaagcggagaaactcgctggagaatatgaagggttttacctctcaaacaag
ctgcgtgggagccagccgtgtgtcctgcttgccgaacagggtcgtggtcggaacctcatc
ctgtataaacccaacatcggtaaacaggctcatcctgagaacctggacaacctcctcctg
agatactacaaggtgacgcctgatgaagcaaaggatttctggaaaagtcagtttgacttc
tccttcagaaactgcacccatgccaattggaagggtaagtgtaagcagatcgaggagggg
catgagtgttttctggggatgcgcctccggcagtatcacatgttgtgtggagctctgctg
agggtttggaagcgagtgtctgacatagtctcggacatcaccaactccagcatcctgcag
atcgtacggctcaaaacgaaacagaacagcaaacaagttggtataaaaatcccagaaaac
tgtgtatcccgcgtacgcgccgagctctctcggatggacgaggaggtgaagaaagctcgg
cgagagagagagcagctcgcaaaagagcgtcttaaccaagagatgctggccaagatgatc
cacgcccgcaagctcatcgccaaccctccccgctccctgccgaaccaccttcactaccca
cgatcccttctggcacctgcggtgcagccaaaacctgaagctgtcagcgaggtcctggat
ctgaccatcagcccctgcccttcgccggacatcaaaccgcctgcgtcagacctaaacggc
gtgtccctaaacggagcgatgctcaccggcagaggacggccgtgcgcagttgttccagag
acgtacaacctggaagaactgatttcccaggagcggcagagacatagtcaggtgccgctg
aacttgaacatgcgtgtgccgtcgtcgcacgctgctttgaacatcccgcagcagcacgtt
cacacactaaagaatcattcatcattcggggtgctgacgcagcagcagcagcagcagcag
agcggctcccacgcacaatcgtccgcgcagtacagcgcgcttctgtcgcagctgcagcga
gggcacgacaaatccttagtgctgcagcttctcaatcaaatgcaacggcaaactgtcacg
ccagtgcaatcgccgcacgtaccgctacaccagaacagccaacgcatgccgcacacttca
aactcgcacgcgcagctgtcaaaacgacagccgcaacccctggagtcgcatgtcactcag
cctgctcgcgaaagagcaaacgatgacttcactttcgacgacttggacttcggttaccct
tcgcccgattcgcaacttaagtaccctttcacctcacaggccctgccatcctcgactccg
ccccctcctccttattcctcctccctctttgcgtcggcacctacaaactcctccctctct
gactctagctcctcctcctcgcacttcactccttcgtcttcttcctccgaacagacgcat
ctgttacccaacggccacagcagtatggaccccctggatacactggatcacatgatccac
ggaacgccctcggatctccgccagtctgtcatccagtttaaatcagtggactgggacgcc
acctag
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