Megalobrama amblycephala (Wuchang bream): 125251556
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Entry
125251556 CDS
T08212
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125251556 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125251556 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125251556 (shhb)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C46: hedgehog family
125251556 (shhb)
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Heparan sulfate / Heparin
Morphogens
125251556 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DUF7764
Hom_end_hint
Vint
Ribosomal_S6e
Alpha_L_fucos
Cas_Csy1
Motif
Other DBs
NCBI-GeneID:
125251556
NCBI-ProteinID:
XP_048020546
LinkDB
All DBs
Position
LG17:complement(34444715..34449824)
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AA seq
416 aa
AA seq
DB search
MDVRLHLKQIAFLCFISLLLTPCGLACGPGRGYGNRRHPKKLTPLAYKQFIPNVAEKTLG
ASGKYEGKITKNSERYKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHSDESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSGTVTLADGRRKHIRDLKVGDRVLAADERGNVLLSD
FIMFMDHDPKTRRQFIVIETSEPLRKLTLTAAHLVFIGNASDSLGVTATFASNVKPGDKV
LVSDGTRKILQSVTVKRIYTEEHEGSYAPVTAHGTIIVDQVLASCYAVIENHKWAHWAFA
PVRLSHKLMTWLFPARDSNVTFQEDGIHWYSNVLFHIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaggctgcatctgaagcaaattgcttttctgtgttttatcagcctgcttttg
acgccttgtggattagcctgtggtcctggtagagggtatggaaaccgaagacacccaaag
aaattaaccccgttggcttacaagcaattcattcccaacgttgccgagaaaacgcttggg
gccagcggcaaatacgaaggcaaaatcacaaagaattcagagagatataaagagctgatt
ccgaattataatcccgatatcatctttaaagacgaggaaaacacaaacgctgacagactg
atgaccaagcgctgtaaggacaagttaaattcgttggcgatatccgtcatgaaccagtgg
ccgggcgtgaaactgcgcgtcactgaaggctgggatgaggatggtcaccattccgacgaa
tctttgcactacgagggacgggcggtggacataactacctcagacagggataaaagcaag
tatgggatgctatctaggcttgcagtggaggcaggattcgactgggtctattacgaatct
aaagcccacatacactgctccgtcaaagcagaaaattcggtcgctgctaaatcaggtgga
tgctttcctggatctggtacagtgacacttgcagacgggaggaggaaacatatcagagat
cttaaagtgggcgaccgggttttagctgccgacgagagaggaaatgtcttattaagcgac
ttcattatgttcatggaccacgatccgaaaacgagaaggcaattcatcgtcatcgagacg
tcagagcctttaagaaagctcacgctcacagccgcgcacctagtcttcattggaaatgct
tcagatagtttgggtgtaacagcaacatttgccagcaacgtgaagcctggagataaggtt
ttggtgtcggatggcactcgcaagatcctccagagcgttaccgtgaagaggatttacact
gaagagcacgagggctcttacgcgccagtaacagctcacggaaccatcatagtggatcag
gtgctggcttcatgctacgcggttattgaaaaccacaaatgggcacactgggcttttgca
ccggtcaggttaagtcacaagctgatgacgtggctttttccggctcgtgattcaaacgtc
acttttcaggaggacggcatccactggtactcaaatgtgctgtttcacatcggctcttgg
ctgctggacagagactctttccatccgctcgggatttcacacttaagttga
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