Megalobrama amblycephala (Wuchang bream): 125251982
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Entry
125251982 CDS
T08212
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125251982 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125251982 (hnrnpm)
Spliceosome [BR:
mamb03041
]
Common components
Common spliceosomal components
hnRNP proteins
125251982 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
RRM_3
RBD_DEAH11
HnRNP_M_NLS
RRM_5
DUF7552
Motif
Other DBs
NCBI-GeneID:
125251982
NCBI-ProteinID:
XP_048020995
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All DBs
Position
LG2:19363646..19370664
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AA seq
674 aa
AA seq
DB search
MSTEASPEKPGQGNSVNGKSNHESRKERPQKRGGGGRFEPYGNPNKRYRVFVSNIPYDVK
WQTLKDLMKEKVGEVTYVEHLMDGEGKSRGCAVVEFRTEELMKKAVEKVNKHVMNGRPLK
VKEDPDGVIAQREANRAHGGGGGGGGPPGMGGGMGGGMGGGMGGGMGMGMGPGPGAPPMV
NIPPSLMNNPNIPNEIIHGLQSGKIGSTIFVANLDYKVGWKKLKEVFGMAGAVVRADILE
DKDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRVMHVKLDEKSLPKGDFAPPDRPPAL
PRGLSGVGLGLGPGGQPIDATQLNRGGMGNMGPGGMDGMGFGGMGRVGGIDNFGGGMNNM
DRFGPSGMGRMNADMDRGIGGGFDREFGGRNDMGMSRSNFGDSFDRGMGNTMGMDRMNSG
MDRLGGGMDRMGGLDRMGMDRMDRMSDLDRLGTGFDRMGSGLDRLGPSMDRLGSGLDRMS
SSVDRMGPGGFDRLGPSSMDRMSGGMDFASPMGMDRMNAGLDRMGSNFDRMGSGGMDRFP
SSGLDRMGTSMDRMGSGGVGGQFDRPADMDRGNFGTPFSGSGQGGPGAGGANARKGCQIF
VRNLPFDFTWKMLKDTFNSCGIVQYADIKMENGKSKGCGVVRFDSPETAERACRTMNGYR
LNGREIDVRIDRNA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgaggcttcaccagagaaaccaggccaaggaaattcagtgaacggcaagtcc
aaccatgagtccagaaaggagaggccccagaagcgtggtggcgggggacgatttgaacct
tacggaaaccccaataaaagatatcgtgtgtttgtcagcaacattccctatgatgttaaa
tggcaaacactaaaagatctcatgaaggagaaagtgggtgaggtaacgtacgtggaacac
ttaatggacggagaaggcaaatcaaggggttgtgctgtggttgagttcagaactgaagaa
ctcatgaaaaaggctgtagagaaagtcaacaaacatgtcatgaatggccgtcctctcaag
gtcaaagaggatccagatggagtgattgcccagcgtgaagctaatcgggctcatgggggt
ggtggtggtggcggcggacccccaggcatgggtggaggaatgggaggcggcatgggaggc
ggcatgggtggaggcatggggatggggatgggtccagggcctggtgctcctccaatggtc
aacatccctcccagtctcatgaacaaccccaacattcccaatgagattatccatggactc
cagtctggaaaaattggaagcaccatttttgtggctaatctggactacaaggttggctgg
aagaagctcaaagaggtgtttggaatggctggagcggttgtgcgtgctgatatcctggag
gataaggacggaaaaagcagaggcatgggaacggttacgtttgaaatgcccattgaggcc
gttcaagcagtctccatgttcaatggacagctcctcttcaacagggtcatgcacgtcaaa
ctggatgagaaatcccttcccaaaggtgactttgcgcccccagatcgtcctccagcactt
ccccgtggtctgagcggtgtcggccttggtctgggacccggcggtcaacccattgatgct
acccagctcaaccggggtggaatgggcaacatgggcccaggaggaatggatggaatgggc
tttggtggcatgggtagagtgggagggattgataattttggaggaggtatgaacaacatg
gatcgttttggaccctctggaatgggaagaatgaatgcagatatggatcgtggaattggt
ggtggctttgatagagaatttggtggccgtaatgacatgggaatgtcacgtagcaacttt
ggagactcttttgaccgtggaatgggaaacaccatgggaatggatcgtatgaattctggc
atggaccggcttggtggtggcatggaccgcatgggaggactagaccgaatgggaatggat
cgcatggaccgcatgtctgatctggacaggttgggaactggctttgacagaatgggttca
gggcttgaccggctagggcccagtatggatcggctgggatcaggccttgaccgcatgagc
tccagtgtggaccgcatgggccctggtgggtttgatcgcttgggcccgtccagcatggat
cgtatgagtggcggaatggactttgcttctcctatgggcatggacaggatgaatgcgggc
ctcgaccgaatgggttcaaacttcgaccgcatgggctccggtggcatggaccgctttccc
tcctcgggccttgatcgcatgggtaccagcatggatcgtatgggctctggtggtgtcggt
ggtcagtttgacagacctgctgatatggaccgtggcaactttggcactcctttcagtggg
tctggacaaggagggccaggggctggtggagccaatgccaggaagggctgccagattttt
gtcagaaatctgccctttgacttcacctggaagatgttgaaggacactttcaattcatgt
ggcattgtgcagtatgcggacataaagatggagaacggtaaatccaagggctgtggtgtg
gtgcgctttgatagtcctgagactgcagagcgagcctgtcgtactatgaacggctaccgg
ctaaatgggcgagagattgacgtcaggattgacagaaatgcataa
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