Megalobrama amblycephala (Wuchang bream): 125252158
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Entry
125252158 CDS
T08212
Name
(RefSeq) DNA repair protein RAD50-like isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03440
Homologous recombination
mamb03450
Non-homologous end-joining
mamb04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125252158
03450 Non-homologous end-joining
125252158
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125252158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mamb03032
]
125252158
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125252158
DNA replication proteins [BR:
mamb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
125252158
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
125252158
BRCA1-C complex
125252158
NHEJ (non-homologous end-joining)
MRX complex
125252158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
AAA_29
Intein_splicing
AAA_13
AAA_16
DUF6284
Motif
Other DBs
NCBI-GeneID:
125252158
NCBI-ProteinID:
XP_048021208
LinkDB
All DBs
Position
LG18:6956724..7014565
Genome browser
AA seq
1361 aa
AA seq
DB search
MGGLGSLPFAVAGVTALTGGQSLGSAGKGPTDRRSQDGLSGNKSKHWSKMSKIEKMSILG
VRSFGVEDKDSQVISFFSPLTVLVGPNGAGKTTIIECLKYITTGDFPPGSKGSTFVHDPK
DAHETDVQALIKLKFKDVNGETMMVHRSMQSTQKGKKTEFKTIDGLIYRFQNGEWKRLNS
KCSEIDREMVSLLGVSKAVISHVIFCHQEESNWPLSEGKALKQKFDDIFSATRYIKVLET
LRKLRQKQDDTVKNCQVELKYLKQDKDKAQEIREQLTTKEAQLSSSKENVQRIENQIDPL
ENRLYDLDSSLSKIMKLDNDIKALESRKKQMEDDNRELEEKMEQVFQGSDDQLQDMYQNH
QRTVKEKERRLTECQRELERAGRECQRMNRDRSVLLVEQGRLQLEADRHTENIKKRDNQV
KSLASSLELEGYDRTPLNERQLHSFHRQAEERLKQDSKDLNQTMHDMQEKEAQKQQSIDD
LRDKKTGLERTIELKRDIQAKKQQELKSIKSDLQRLEGSSSRLQELDTELQKMERELDNA
VQACTVDSLKAEVIELQREKTELDQAQRKLDKEMELLNTHTRAHAEMDMLKKTKMDKEEQ
VRKIKSRHNEKLVSLLGHFPSKRELEDWIHSKSREINSTRERLSKMNKDLASGEQNKTHF
TAEINRKEELLASYKERLFNVCGSQDFQSDLSKLDDELEKCSKQRAMLAGPTAVYSQFIS
QLTEEGKPCCPVCQRVFPSEAELQDVINDMQSKLRLVPDKLKNTEQDLKRKERRRDEMMA
LKPIRQSIVDLQEKELPELRNKLQRVNRDIEKLKGDTEEQETLLCTLMSEEDTAKACLQD
VSLMDRFQLDLKDVERKIAQHAARLQGVDLSRTMQQVSQEKQETQLRLDTTCSKIELKRK
LIQDQQEQIQALRSSVNEIRGEKLQISSNMQKRQQLEEQCVEFSTEIQTLHRDIRDAKEQ
MSPLAATLEKLQLEKQDLAKRRMQKQAEGQEKINAIKEKVKNLTQLEKEITKYIEEGKDT
YKEQKETELQEVDKQLHEAEKHREKTNKDMGNIRQDIDTQKVQERWLQDNLTLRKRVEEL
KEVSRKREALLKEMGNMQVVQLRNERREVERKLEDLKKNRSVALGRQKGYEDEILRFRKE
LSEDQYCRAEDLYRDKMIVMRTTELANKDLDIYYKALDQTIMKFHSIKMEEINKIIRDLW
RSTYRGQDIEYVEIRSDVDENASAGLKRRTYNYRVVMVKGDTALDMRGRCSAGQKVLASL
IIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQRNFQLLVITHDE
DFVELLGRSNYVEHFYRIRKNQDQCSEITKCSINTLNSYLN
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggctgggctcactgccatttgccgttgccggtgtcacagcgctgacaggcgga
cagagcctgggcagcgctgggaaaggaccgaccgaccgacgctcacaggatgggttgtca
ggcaacaagtcaaagcactggtccaaaatgtccaagattgaaaagatgagtattctggga
gtgaggagttttggagttgaggataaagacagtcaagtgatctccttcttcagccctctg
acggtgcttgtgggacctaatggagctggaaaaacgaccatcattgagtgtcttaaatat
atcactacaggagactttccaccaggaagtaaaggaagcacatttgtccacgatcccaaa
gacgctcatgagacggatgtacaggcactgatcaaactcaagtttaaagatgtgaatggt
gaaactatgatggtccacaggtctatgcaaagtacacaaaagggcaagaaaactgagttc
aaaaccattgacggtcttatttacagattccagaatggagaatggaaaaggctgaattct
aaatgttctgaaatagaccgcgagatggtctcattgctgggagtctccaaagctgttatc
agccatgtcatcttctgccatcaagaggagtccaactggcctctcagtgaagggaaagct
ctcaagcagaagtttgatgatattttctcagccacaaggtacattaaggttttggagact
ctgcggaagttgaggcagaagcaggacgatactgttaaaaactgccaggtggagctcaag
tacctaaaacaggacaaagataaggcccaagagattagagagcagctgaccactaaagag
gctcagctgtcttcctccaaagagaatgtccaacgcatcgagaatcagattgacccactg
gagaaccgactctatgacttagacagcagcctcagcaaaataatgaagttggataatgac
atcaaagctctggaaagcaggaagaaacagatggaggatgataaccgggaactagaggaa
aagatggagcaggtgtttcagggctcagatgatcagctgcaggacatgtatcagaaccac
cagcggactgtcaaagagaaggaaagaagacttacagagtgtcagcgtgagcttgaacgg
gccggccgagagtgccagaggatgaaccgcgacagatctgtcctgctagttgagcaaggc
cgtctgcagttggaggcagataggcacacagagaacattaaaaagagggacaaccaggtg
aaaagtttagcgtcttccctggagttggagggctatgatcggacaccgcttaacgaacga
cagctccatagcttccacagacaagccgaagagagactgaagcaggactctaaagacctc
aaccaaactatgcatgatatgcaggagaaagaggcacagaagcagcaaagcatcgatgat
ctccgtgataagaagaccggtctagagagaaccattgagctgaagagagacatacaggcc
aaaaaacaacaggaactgaagagcatcaagtctgatctccaaagactggagggctcctct
agcagactgcaggagctggacactgagcttcagaaaatggagcgggagcttgataatgcc
gttcaggcctgtactgtggacagtctgaaggcagaagtaattgaactacagagggagaaa
actgaactggatcaggcccagcgcaaactggacaaggagatggaactgctcaacacacac
accagggcacatgcagagatggacatgctcaagaagaccaagatggataaagaggagcaa
gtgaggaagatcaagtccagacataatgaaaagctggtgtctctgctgggacacttccca
agcaagagagagctggaagactggatccactccaaatccagagagatcaactccaccaga
gaacggctcagcaaaatgaataaggatcttgcatctggagaacagaataaaactcacttc
acggcagaaatcaatcgtaaggaagagctgctggccagttataaagagagactttttaac
gtgtgcggcagtcaggacttccagtcggacctgagcaaactggatgatgagctggagaag
tgttctaaacagagagccatgctggcgggtcccacagccgtgtacagtcagttcatcagt
cagctgacggaggagggtaagccctgctgtcccgtatgtcagcgtgtgttcccgtcagag
gcagagctccaggatgtcatcaatgacatgcagtccaagctgcggctcgtcccagacaaa
ctgaagaacactgagcaggacttgaagagaaaagagcgcagacgtgatgaaatgatggct
ctgaaacccatcaggcagtccatagtagatctccaggagaaagagctgccagagctcaga
aataaactccagcgtgtgaatcgagacattgagaagctgaaaggagacactgaggagcag
gagacactgctgtgcacactgatgtctgaggaagacacagccaaggcctgtctgcaggac
gtctccctcatggatcgctttcagcttgacctgaaggatgtagagagaaagatcgctcaa
catgcagccaggctgcagggagttgacctcagccgcaccatgcagcaggtcagccaggag
aaacaagagacccaactccgcctggacaccacctgcagtaagatcgagctgaaaaggaaa
ctgatccaggaccagcaggagcagatccaggccttgaggagcagtgtaaacgagattcgt
ggagaaaagctccagatttctagcaacatgcagaaacgtcaacaattggaggagcagtgt
gtggagttctccactgaaatccaaacgctccaccgagacattcgagatgcaaaggagcag
atgtctcctctagctgcaactctggagaagctccagctagagaaacaggaccttgccaag
cgcaggatgcagaaacaggcagaagggcaagaaaagataaatgcaatcaaggaaaaagta
aaaaacttgacccaacttgaaaaagagatcaccaagtacattgaagagggcaaagacacc
tacaaagagcaaaaagaaactgagctacaagaggtggacaaacaactacacgaggctgaa
aaacatagagagaagaccaataaagacatgggcaacatccgacaagatattgacactcag
aaggttcaagagcgctggctacaggataacttgaccttacggaagcgtgtggaggagctg
aaagaggtgtctagaaaacgtgaagccttgcttaaggagatgggcaacatgcaagtcgtg
cagctgcggaatgagcggcgagaagtggagcgaaagttggaggacctgaaaaagaaccgc
agtgtggctctcggtcgacagaaaggctacgaggacgagatcctccgttttcgtaaagag
ctcagtgaggatcagtattgccgggccgaggatctctacagagacaaaatgattgtcatg
agaacaacagagttggccaataaagacctggacatctactataaagctctagaccaaaca
ataatgaagtttcacagcattaagatggaggagattaataaaatcatcagagatttatgg
cggagcacatacagaggacaagacattgagtacgtagagattcgctctgatgtggatgag
aacgcctctgctggactgaaaaggaggacttataactatagagtggtaatggtcaaagga
gacacggctttggacatgcggggacgttgcagtgctggacaaaaggttctcgcctccctc
ataatacggttggctctggctgagacgttctgtctgaactgtgggattctggcgctggat
gagcccaccaccaatttagacagagaaaatatagagtccttggcacacgcactggtggag
ataatcaagagtcgttctcgtcaacgcaacttccagctgcttgttatcacccacgacgag
gattttgtcgagctcctgggacgatccaactatgtggagcatttctacaggatcaggaag
aatcaggaccagtgctcagagatcacaaagtgcagtatcaacacactcaactcctaccta
aactga
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