Megalobrama amblycephala (Wuchang bream): 125252472
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Entry
125252472 CDS
T08212
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04080
Neuroactive ligand-receptor interaction
mamb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125252472
04082 Neuroactive ligand signaling
125252472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125252472
Ion channels [BR:
mamb04040
]
Ligand-gated channels
GABA-A
125252472
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
125252472
NCBI-ProteinID:
XP_048021762
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Position
LG18:complement(875168..980769)
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AA seq
612 aa
AA seq
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MGLHWIPLVVLGWFRFLSILLNIQFITSTSPNDGPTEVNCHLNALLAPSAPYRSWMLRWS
THAHHSGITAQRTLSWIFSVFTETRNHKSMAIFRIRQKGFMRVWTFPVIVAVVCAQSVND
PSNMSIVKETVDRLLKGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQ
AWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVL
YGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDHAVTGVERIELPQ
FSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYD
ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNYI
FFGRGPQRQKRAAEKASTANNEKMRMDPNKWMVGNVVQRDDALYARMKQRDIDAHDSMWE
PIFVDDAALGLGDSKNKMDPHENILLSPLEIKNEMGTSELTLGLGDPRTTMLAFDSTTLQ
YRKAGLARHNFGRNALERHVTQKKSRLRRRTSQLKINIPDLTDVNSIDKWSRMIFPTVFS
FFNVIYWLYYVN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcactggattccccttgtcgtgttggggtggtttagattcctatcgatcctt
ttaaacattcaatttatcacctctacctccccaaatgatggaccaactgaagtcaactgt
catttaaatgctcttctagcaccatcagcgccataccgctcctggatgctgcgctggagt
acgcatgcgcaccacagtggaattactgcacagcgcactctaagttggattttttctgtc
ttcacggaaaccagaaatcataaaagtatggcgatctttagaataagacaaaagggcttt
atgcgcgtctggacgttccccgtgatagtggccgtggtgtgcgcgcaaagtgtcaatgat
ccaagcaatatgtctatcgtaaaagaaactgttgatagactattgaaaggatatgacatt
cgcttgaggccagattttggaggtcctccggtgggagtggggatgaatatagacatagcc
agcatagacatggtatcagaagtgaatatggactacacattgactatgtatttccagcaa
gcctggcgagacaaacgtctgtcctattctgagattcctcttaacctgactctggataac
agggtagctgatcagctgtgggtgccggacacatacttcctgaatgacaagaagtctttt
gtacatggtgtaacagtgaagaacagaatgatccgtctccatccagacggcactgtgctt
tatgggctcaggattactaccacagccgcctgcatgatggacttgcgcagatacccacta
gatgagcagaactgcacactggaaatcgagagctatggctacaccacagatgatattgag
ttttactggcgaggtggcgaccatgcagtaacgggggttgaaaggatagagcttcctcag
ttctctatagtggactacaaactcatctctaaaaatgtggtgttttctacaggttcatat
cctcgcctctccctgagcttcaagctcaagagaaacattggctacttcattctgcagacc
tacatgccttcaatcctaatcaccatcctatcttgggtatccttctggatcaactatgat
gcctcggctgccagggttgctttaggcatcaccactgtgctgaccatgaccaccatcaac
acacatttgcgggagactcttccaaagattccatatgtcaaagccattgacatgtacctg
atgggctgtttcgtcttcgtcttcctggctctgctggagtatgcgctggtcaactatatc
ttcttcggcaggggaccgcagcggcagaagagagctgcagagaaagcctccacagccaac
aatgaaaaaatgagaatggatcccaacaaatggatggtgggaaatgtagttcagagagac
gatgctctgtatgccagaatgaaacagagggatattgacgcacatgactccatgtgggaa
ccaatctttgtggacgatgcagcattaggactaggcgattcaaaaaataagatggaccca
catgaaaacatccttctcagtcctctggagatcaagaatgaaatgggcacatcagagtta
accctgggtttgggcgacccccgtacaaccatgctggcctttgacagcaccacgctgcag
tatcggaaagccggcctggccaggcacaactttggacgcaatgccctggaacggcacgtt
acgcagaagaagagccggctacgacggcgcacttcacagcttaaaatcaatatccctgac
ttaactgatgtcaattcaatcgacaaatggtcgagaatgatcttccccaccgtattttct
ttcttcaatgtcatctattggctttattatgtcaactaa
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