Megalobrama amblycephala (Wuchang bream): 125252492
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Entry
125252492 CDS
T08212
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125252492 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125252492 (nup54)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125252492 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
LPP
XhlA
Motif
Other DBs
NCBI-GeneID:
125252492
NCBI-ProteinID:
XP_048021800
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All DBs
Position
LG18:complement(39031027..39037712)
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AA seq
548 aa
AA seq
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MSVRVRNHLFMFLFPVGLYRGRTGNMAFNFGGASGSAGLSGTGFGAATTTSASTGFGFGS
GSAGAFGGFGPTTTSAGAGTSFNFSTPSNAGTSLFGNTQNKGFGFSSALGASAAPGTGFG
ALGGTGLGFGGFGGIQTNQNQQGVGGLFSQQASQSSQLYNTASALSAPSVLSDERDSILA
KWNQLQAFWGVGKGYFSSSAPPVEFSQENPFCRFKAVGYSCVPGVKDEDGLVALALNKKE
ADVRSQQQQLVESLHRVLGGNQTLTVNVEGVRALPDDQTEVIVYLVERSPNGTSKRVPAS
TLYNYMEQMNVKSQLQQLGVFMTVSRTALTPAQLKQLLQNPPAGVDPIIWEQAKVDNPDP
EKLIPVPMVGFKELLRRLKIQDQMTKQHQTRVDIISNDISELQRNQATTAAKITQYKRKL
MDLSHRVLQVLIKQEVQRKSGYAIQLDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIR
MQNHFGAVRSEERYRVDADLLREIKQHLKHQQEGLSHLISVIKDDLNDIKTIEDGLHDSI
HGRSSKLS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttagggttaggaaccacttgttcatgtttttgtttccggtcggactgtatcgt
ggcaggaccggaaacatggcgttcaacttcggcggcgcgtcaggcagcgctggtctttct
ggcactggctttggagccgcgaccacgacatccgcgtccacgggcttcggtttcggatcc
ggtagcgcgggtgcgttcggaggattcggccccacgaccacctccgccggcgctgggact
agcttcaatttctccacgccgtcaaacgcaggtacgagtctcttcggaaacactcagaac
aagggcttcggcttctcgtcggctctgggtgcgagtgcggcgccggggacgggattcggc
gctctgggcggaaccggactggggttcggaggattcgggggaatccagaccaatcagaac
caacaaggtgtaggtgggctgttcagccagcaggcgtctcagtccagtcagctgtataac
acggccagcgctctctccgccccgtcggtcctcagcgatgagcgcgactccattctggcc
aagtggaaccagctgcaggcgttctggggcgtggggaagggttacttcagcagcagcgcc
ccgcccgtggagttcagccaggagaaccccttctgccgcttcaaggcggtgggctacagc
tgtgttcccggtgtgaaggatgaggatgggttagtggctctggctctcaataagaaggaa
gcagacgttcgctctcagcagcagcagttggtggaatcgctgcacagggttctgggagga
aatcagacgctgacggtgaacgtggagggagtgcgagcgttacctgacgaccaaacggag
gtgatcgtgtatctggtggagcgttctccgaacggcacgtccaagcgagttcccgcgtcc
acgctctacaactacatggagcagatgaatgtgaagtctcagctgcagcagctgggcgtc
ttcatgaccgtcagtcggaccgcgctgacgccggcgcagctcaagcagttgctgcagaac
ccgcccgcaggtgtggaccccatcatctgggaacaggccaaagtggacaatccagaccca
gagaagttgattccagtgcccatggtgggcttcaaagagctgctgcgcagactgaagatc
caggatcagatgaccaaacagcaccagacccgagtggacatcatctccaacgacatcagc
gaactgcagagaaatcaggccacgactgccgccaaaatcacacagtacaagcgcaagctc
atggacctctcgcacagagtcctgcaggtgctgattaaacaggaagttcagaggaagagc
ggttacgccatccagctggatgaggagcatctgagggttcagctggacaccatccaatca
gagctcaacgctcccacacagttcaaggggcgactgaatgaactcatgtctcagattcgg
atgcagaatcatttcggagccgttcgttcagaggagcgttaccgtgttgatgccgacctg
ctgagagaaatcaaacagcatctgaagcatcagcaggagggtttgagtcacctgatcagc
gtcattaaagacgatctgaacgacatcaagacgatcgaagacggacttcacgacagcatt
cacgggcgcagcagcaaactcagctga
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