Megalobrama amblycephala (Wuchang bream): 125252496
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Entry
125252496 CDS
T08212
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125252496 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125252496 (nfrkb)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
125252496 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
125252496
NCBI-ProteinID:
XP_048021809
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All DBs
Position
LG18:complement(14034809..14052370)
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AA seq
1299 aa
AA seq
DB search
MDALDHMLTDPLESGMDQDGRVMEECMLGNCRVRVPEDLLEDPEIFFSVMSESTWTDVLT
DAQRTHLSQLLPQFSENNTSEQNSIISDLFNNQNFFFGNPLHIAQKLFRDGYFNPEVVKY
RQLCAKSQKKRHIFSLQQYYHKLLKQILVSRKELLDLAVRSGPELAVKRRYPVPSHKEML
EQRVRRRVAHIQKDVKTECGDSNVSSDEDADTASWLPIPQSPSSPTPTVSLRVLPSLSTQ
DMKTRDKPELGEKELRAMLQRHREKRKRQPDHPDLMTSDLHLGDIMSRVNIGRKGSVATV
FDLALPKKKIKEERKKKKMRPIKMESEEVCDVQMSTASMNSGHADAPTAPPQTVKEEPID
ESQTSPDRVEEITMSFFHLLEDILRLESLATSSALEEKVQQWQSSPASALNPWFSMAPCW
SELVVPALQFLAGESKAGVMALPTGFMPFVELKELSQQWKWICPSQDGDKDLSALCQLWL
ESKDHVIVKQEGEETAELTPPTPRVWTDYVVRPSTGEERHVFQEQEQQRYDQPHKAFTYR
MHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAE
ICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEF
ERIHQAQAAAAKAKKALQQKPKPAPKPKAGGKEPGSKNGAAEAGQSSGSEGVAIASTSLS
QTPSTPTPSTPGTPKSPLPPTVATPTKVGATEPVKTNPSVLLVSPPSMPQLGTLLSASQP
GPQVSQQASPQPATRVVAHSAATGSLPQVRVVTAQPGLPTSSASQAATLVHQSPHHIRVP
VTVAHGKNITQAVVTLPLRSQSAGSPIQVQSSRGQASLTVPGLASAVTVTKPQTSSPASP
AHNPTSPAVLQGVSSQNIIKQVAITGQLGVKAQSGAGIPLTATNLRIQGKDVLRLPPSSI
TTDAKGQTVLRITPDMMATLTKSPMATVKLTPDMLSSATSSGSKSISATLHVSPSQPSPP
TSNTTASTTAENLATKAPATGTATLVKVHPELKAACDTAIRLMPALAVTMTDPKARTFST
VTSSDSKAGTTIRIVPNLGVIPQKQGQTVSISTTTTSTKPVTVSSGAATVAIATSGVGGA
KGVTLGPAATGSTLSLGTATATVRQVPVSATVVATQAGKLPTRITVPLSVLSQPLKNKSV
VTTPILKGNISTNISNLGRNIILTTMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVR
IQTVPAQQLQRTAASSPKSTVSTVVVSTAPSPKTNPDPQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggatgcactggatcacatgttaacagacccactggagtctggaatggaccaggatggt
cgtgtgatggaagagtgcatgctgggaaactgcagagttcgtgttcctgaagatttgctg
gaggatccagagattttcttttcggtgatgagtgaaagcacatggacagatgttctcaca
gatgctcagcggacacaccttagtcagctcctgcctcagttctcggagaataacacctca
gagcagaacagcatcatcagcgaccttttcaacaaccagaatttcttcttcggaaacccc
ttgcacattgcccagaagctcttcagagatggttactttaacccagaagttgtcaaatac
agacaactttgtgccaaatcgcagaaaaaaaggcacatcttctcccttcagcagtactac
cataaattactcaagcagatcctggtctccagaaaggagttgctggatttggcggttcgc
agtggacctgagcttgcggtaaaacggcggtaccctgtcccctctcataaggagatgctg
gagcagagggtgagacgtcgagtggctcacatacagaaggatgtgaaaacagagtgtggg
gacagtaatgtgtcatctgatgaagatgcagatacagcctcttggttgcctattcctcag
tcgccctcctcccctactccaactgtctctctcagggtcctacccagcctttctactcag
gacatgaaaaccagagacaagcctgagctgggtgagaaggaactaagagccatgctgcag
agacacagagaaaaaagaaaacgacagccagatcaccctgaccttatgacctccgacctc
catcttggtgatatcatgtcacgagtcaacatcggcagaaaaggatctgttgcaaccgtc
tttgacttggccctacctaagaagaagataaaggaggagaggaagaagaaaaagatgcgc
cctattaaaatggaatcggaggaggtctgtgatgttcagatgtcgacagcttccatgaac
tcgggccatgctgatgcccccactgctcctccacaaactgttaaagaagagcccatagac
gagtcccagacgagccctgacagagtggaggagataaccatgagcttttttcatttgctt
gaggacatcctcagactggaaagtctagcaacatcctccgcgttggaagagaaagtccaa
caatggcagtcatctccagccagcgcactcaacccctggttctctatggccccctgctgg
tcagagttggttgtacctgctctacaatttctcgctggagagagcaaagctggtgtgatg
gctctgcctactggcttcatgccttttgtggaattaaaggaactctcacagcagtggaaa
tggatatgtccaagtcaggatggagacaaagatctgagtgccctgtgccagttatggctg
gagtcaaaggatcatgtgattgtcaagcaggagggagaggaaaccgcagaactcactcct
ccaacacccagagtatggactgactatgtggtgaggccaagtactggagaggaaaggcat
gtttttcaagagcaggagcagcaacgttatgatcagcctcataaagcctttacttaccga
atgcatggctttgaatctgtggtgggaccagtcaagggagtttttgacaaggagacgtcg
ctcaataaagcacgagagcattctttgcttcgctctgacagaccggcctacgtcaccata
ctatctcttgtaagagatgctgctgccaggcttcctaacggagaaggtaccagagctgag
atttgtgagttactgaaggactcgcagttcctagcccccgatgtcaccagtgctcaggtg
aacactgtggtgagtggtgcacttgaccggctgcactacgagaaagacccttgtgtgaaa
tacgacatcggccgcaagctgtggatctacctccacagggaccggagccaggaggagttt
gagcgaatacaccaggcccaggctgcagctgctaaagccaagaaagctttgcagcagaag
cccaaaccagcaccaaaacctaaggcaggtggtaaggagccaggcagtaagaatggtgct
gcagaggctggccagagctcaggcagtgaaggagtagccattgcatccaccagcttgtct
caaactccctccacccccacaccgagcacccctggaacccctaaatcacccctccctccc
acggtagctactccaaccaaagtaggcgccacagaacctgtcaaaaccaatcccagtgtc
ctgttggtgtctcctccttccatgcctcagttaggaacgttgctgtctgcgagtcagcca
ggtccacaggtttcccagcaggcctctccgcagcctgcaactcgggtagtggcacactcg
gctgccactggctctctgcctcaggtgcgagtggtcactgcccagcctggtcttccgacg
tcttctgcaagccaggcggccacattagtgcaccagagccctcaccacatcagggtgcct
gtcactgtggcgcatggaaagaacatcacgcaggcagtggtgactctaccactaagaagc
cagtctgcaggaagtcccattcaggtgcagtcttcacggggtcaggccagtcttactgtt
ccaggtcttgcatctgctgtcacagttaccaaacctcagacgagctcccctgccagcccg
gcacacaacccaacatcacctgctgtattgcagggtgtcagcagccagaatattatcaaa
caggttgcgatcactggtcaattaggtgtaaaggcccagagtggggccgggatccctctc
accgccactaacttacgcattcagggaaaggatgtgctccgcttgcccccctcctcaatt
acaactgatgccaaaggtcagacagtacttcgcatcactccggacatgatggccaccctc
actaaatctccaatggccactgtcaaactcacaccagacatgctgagcagtgccacaagc
tcaggcagcaagagcatctccgccacactacatgtgtctccatcccagccttcaccccct
acctcgaacaccactgcatccacaacagctgagaacctggccaccaaagcacctgccaca
ggcaccgccaccctagtaaaggttcacccagagctgaaggccgcctgtgacacggccatc
cgcctcatgccagccctggctgtcactatgactgaccccaaggcccgcacattctcaacc
gtcacctcgtctgactctaaagcaggaaccactattcgaatagtgccaaatcttggtgtg
atccctcagaaacaaggtcagactgtctcaattagcacaaccaccacaagtacaaagcct
gtcacggtatcatcgggggcggccactgttgcaattgccaccagtggagtgggaggggcc
aaaggcgtgacactgggacctgcagccacaggctctacgctttctctgggcactgctacg
gccacagtcagacaggtgccggttagtgctactgtagtagccacacaagctggaaagctt
cccacgaggatcacggtgcctctatctgtcctcagccaacctttgaaaaataagagtgtg
gtcactactcccatacttaaagggaacattagtaccaatatcagcaatctggggaggaac
attatcttgactaccatgccggcaggcaccaagttgattgctggaaacaagccggtcagc
tttgtgactgctcaacaactgcagcagctacagcaacagggacaggccacacaggttcga
atccagacagtaccggctcagcagctacagcgcacagccgccagctctccgaaatccaca
gtgtctacggtggtggtctctactgcaccctcgccaaaaacaaacccagaccctcaatga
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