Megalobrama amblycephala (Wuchang bream): 125252626
Help
Entry
125252626 CDS
T08212
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mamb03009
]
125252626 (ddx10)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125252626 (ddx10)
Ribosome biogenesis [BR:
mamb03009
]
Eukaryotic type
90S particles
Helicases
125252626 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
125252626
NCBI-ProteinID:
XP_048022029
LinkDB
All DBs
Position
LG18:13952515..13984776
Genome browser
AA seq
859 aa
AA seq
DB search
MRVKKNKEKKKITDDPVRDFEKWKKKYDKTKTRVKRAQKPTNKKRGWEAERENIQRLVDR
YSQINAKEVVKFSDFPLSRNTVKGLLDCRYRQPTEIQRQTIGFALQGKDVLGAAKTGSGK
TLAFLIPVLECLYREQWTAMDGLGALIISPTRELAYQTFEVLRKVGRKHEFSAGLVIGGK
DLKDESEKIHRTNIIICTPGRLLQHMDENATFHASNLHILVLDEADRILDMGFADTLNAI
VENLPKTRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEQAKFSTPATLEQNYVVCELHQ
KVNMLFSFLRSHLQKKIIVFFACCKEVQYLFRVFCRLRPGISVLALHGKQQQMKRVEVYN
DFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKEGGEALLVL
LPSEEKGMIEQLQEKKVPINKIQVNPEKLVSVQEKLEAFLAQEIDQKERAKRCFMSYLRS
VYLMKNRDVFDVFQLKLPEYAMSLGLAVAPRVRFLIKAQQQKSEAAQDDSGTAEHEPEDE
LESFKAKLKGRQPESQSSQSEEEDDEEEEGDDDDDDDEEEEKETLKPAALLSGFNEEEDD
DNLDLLTVKRKDVFNISEESEDDEGTDANAKNKKLKETKIKGAKKIVKRNLKVNTKKVFT
EEGEEVQQWPPLQRTVVPDEEDDEEVSGINVEAAKERLRKEDQAFDKIEYRRKIQEKHRE
KRLKEKAARREANQKQKEEKNKPAAAADSDEDEDDDDEEEVVAYLSGAEDFDPSTLPDPD
KVRDSEASSEEDGDSSDHGGKKRSFSSDSSEDDDSDDEVQQTQVGRKKPRKESTVTPLDT
GLSLAEDEELVLHLLGNRS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttaaaaagaacaaagagaagaaaaagataaccgatgaccctgtaagggatttt
gagaaatggaaaaagaagtacgataaaacgaaaacccgggtcaaacgagctcaaaagccc
actaataagaaacgcggctgggaggcggagagagaaaacatacagagactggtggataga
tactcgcagatcaatgccaaagaggttgtgaagttctctgattttccactctcaagaaat
actgtaaaaggtcttcttgactgtcggtaccggcagcccacagagattcagaggcagact
attggctttgctttgcaaggtaaagatgttcttggtgctgcaaagacgggctctggaaag
actttggccttcctcatcccggttttggagtgcttgtatcgtgaacagtggactgcgatg
gacggcctcggcgctctcatcatctctcccactcgagagctggcctatcagacctttgag
gtgttgaggaaggtcggcaggaagcatgaattttctgccggccttgtaattggtggaaag
gatctgaaagatgaatcggagaagatccatcgtacaaatatcattatctgcaccccagga
cgtctgctgcagcacatggacgagaatgccacatttcatgcttcaaatctgcacattctt
gtacttgatgaagccgacaggattctagacatgggttttgctgacacactcaatgccatt
gtcgaaaacctcccgaaaacacgacagacccttctcttctccgccactcagaccaagtct
gtcaaagatctggccagactgagcctgaagaacccagagtatgtgtgggtccatgagcag
gccaagttcagcactcctgcaactctggaacagaactatgtggtgtgtgaactgcaccag
aaagtcaatatgctcttctcatttttgaggagtcaccttcagaagaagatcatagtcttc
tttgcctgctgcaaagaggttcagtatcttttccgggtcttctgccggttgcgtcctggt
atctccgttcttgctttgcatgggaaacagcagcagatgaagagggtggaagtttacaat
gactttgtccgcaagacctctgcagtactttttgccacagatatcgctgccagaggactt
gacttccctgcagtgaactgggtgctgcagttcgactgtcctgaagatgcgaacacatac
attcacagagttggcagaacagccaggtataaggagggaggtgaagcgcttctggtcctg
ttgccctcggaggaaaagggcatgattgaacagcttcaagagaaaaaagttcccattaac
aaaatccaggtgaatccagagaagttggtgtcggttcaggagaagctggaggcctttctg
gcacaggaaatagaccagaaggagcgggcaaagaggtgtttcatgtcctacctccgctca
gtctatctgatgaagaacagagatgtctttgatgttttccagctcaaactcccagaatat
gccatgtcactgggtttggcagtggcgccacgggtcaggttcctcattaaggcccagcag
caaaagagtgaagcggcgcaggatgacagcggtactgcagaacacgaacctgaagatgag
ctggagagtttcaaagccaagctcaaaggacggcaacctgagtctcagtcctcacagtct
gaggaagaagacgatgaagaggaggagggggatgatgatgatgatgatgatgaagaagaa
gagaaggagacattaaagcctgcagctctgctatctggctttaatgaagaggaggatgat
gacaatctggaccttctgactgtcaaacgtaaagatgtgttcaatatcagtgaagagagc
gaagacgatgagggtacagatgctaatgccaagaataagaaactaaaagagaccaaaatc
aaaggtgcaaagaaaatagtgaaaagaaacttaaaggtcaacactaagaaggtcttcact
gaggagggagaggaggtacagcagtggcctccgctgcagaggaccgtggtaccagatgaa
gaggacgacgaagaggtgtctggcattaacgtggaagcagccaaagagcgactccgcaaa
gaagaccaggcatttgacaagatcgagtaccgtcgtaaaatccaggagaaacacagggag
aaaaggctgaaagagaaagcagctcggagggaagcgaaccaaaagcagaaagaggagaaa
aacaaacctgctgctgctgctgatagtgatgaagatgaggatgatgatgatgaggaggag
gtggtagcgtatctgtcaggtgctgaagattttgaccccagcacccttcctgaccctgac
aaagtgcgcgactctgaggcctcctccgaggaagatggcgattcatcagaccacggaggc
aagaagagaagtttcagcagcgacagcagtgaggatgatgatagtgatgatgaagtacag
cagacacaggtgggcaggaagaagcccaggaaggagtccacagtaactcctctggacact
ggcctctcgctggccgaagacgaggagcttgtgttgcatttattgggcaatcgcagctag
DBGET
integrated database retrieval system
