Megalobrama amblycephala (Wuchang bream): 125252729
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Entry
125252729 CDS
T08212
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04020
Calcium signaling pathway
mamb04080
Neuroactive ligand-receptor interaction
mamb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125252729 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125252729 (grin1a)
04082 Neuroactive ligand signaling
125252729 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125252729 (grin1a)
Ion channels [BR:
mamb04040
]
Ligand-gated channels
Glutamate (ionotropic)
125252729 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
125252729
NCBI-ProteinID:
XP_048022239
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Position
LG18:28496002..28530299
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AA seq
970 aa
AA seq
DB search
MRLLLLAALFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANLVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLSFDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVT
IHQEPFVYVKPTTLEGTCKEEYTPNGVLIKKVICTGPNETIPGNPSGRPIVPQCCYGFCV
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDNKESSGSQAVGAAGTP
SLPSSSVETQDDRKSGRADSDPKKKPSFRSISTTLASSIKRRRSSKDTQFPPTDITGQLN
LSDPSVSTVV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgctggctgcgttattctcctgctcctgcgtgcgaggcggctgcgag
cccaagattgtgaacattggggccgtcctgagccagaagagatacgagcaggtgttcaag
gatgcggttacccaggcgaacctggtgtacggaagggataaattcaagttgaccgccatc
tccgtcactcacaaagccaatgcgattcagatggcgctgtctgtgtgcgaggatcttatt
tccagtcaggtgtacgccatcctggtgagccatccacctcagtctaatgaccatctgacg
cccactccggtctcctacaccgcagggttctaccgcatacctgtagttgggctcaccacc
aggatgtccatttactcagacaagagcatccatctctcgttcctgcgtacagtgccacca
tattcccaccaggcacatgtttggtttgacatgatgcgggagttccgctggaatcacatc
attctaatcgtcagtgacgaccatgaaggcagagcagcgcagaaaagactagaaactctt
ctggaggagagagagaccaagaataaaaaaaggaactatgaaaaccaagaccaactgtcc
tttgacaacaagagaggacctaaggccgagaaagtacttcagttcaaccaagagactaac
ttaactgctctgctcctggaggccaaagagctggaggctcgagtgatcattctctctgcc
agtgaggaagatgcagccgccgtgtacaaaacagcgcgcttcctcaacatgacaggctca
ggctatgtatggctggtcggggagcgtgagatgtccggtaaagctttgagcgaagcccct
gatgggctgattggcctccagctcatcaacggcaagaatgagtcggcacacatcagcgat
gccgttgcagtcgtagcccagtccatccaagagctctttgagaaagagaacatcacagaa
cctccaaggggctgcgtgggaaataccaacatctggaagacagggccactctttaaaagg
gtattgatgtcttctaagtaccctgagggcctaacaggacgcgttgagttcaatgatgac
ggtgacagaaaatacgctcattacagcattctcaactaccagaagagcagactgattcaa
gtcggcatttacaatggaacacaagtggtgatgaataaacagaggaagatcatttggcct
ggaggtgaaacagagagaccgagaggattccagatgtctactcgattaaagatagtgacc
attcatcaggaaccctttgtgtatgtgaagccaactacgctggaagggacctgcaaggaa
gagtacacacctaacggagtcttaattaaaaaggtgatctgcactggaccaaatgagacc
atcccaggtaacccatcaggacgcccaattgttccccaatgttgctacggattttgtgtc
gaccttctgatcaaactggcaatgaccatgaacttcacctatgaagtacacctggtggca
gatgggaaatttggaacacaggaaagagtaaataacagtaacaagaaggagtggaacggc
atgatgggtgagctcctgggtggccttgctgatatgatcgttgctcccttgacgatcaac
aatgaacgagcccagtacatagaattctccaagccttttaaataccagggactgactatc
cttgtgaaaaaggaaattcctcgtagtacactggactcgttcatgcagccatttcagagt
acactgtggctactggtgggtctgtcggtacatgtggtggcggtgatgctttacctacta
gaccggttcagcccatttggaaggtttaaagtaaacagcgaagaagaagaagaggatgcc
ctcaccttatcttcagctatgtggttttcctggggcgttttgttgaactctggaatcgga
gaaggtgccccacgtagtttttcagcgagaatcttaggaatggtgtgggctggcttcgct
atgattatagtagcatcttatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctgaggaacccatcagacaagttcatc
tatgccacagtgaagcagagttcggtggatatttacttccggcgacaagttgagctgagc
accatgtaccgccacatggagaagcacaactacgagagcgccgctgaagccatccaggct
gttcgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccat
gagaatggcttcatggaggacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgagaatatggcaggtgtcttcatgctagtt
gctggaggcattgcagcaggcatcttcctcatcttcatcgaaattgcatataagcgccat
aaagacgcccgcaggaagcagatgcagctagcctttgcggccgtcaatgtttggaggaag
aacctacaggacaataaggagagctcagggagtcaagctgtgggtgcggctgggactcca
tctttaccctcttcctctgtagagactcaggatgataggaaaagtggtagagcagacagc
gacccaaaaaagaaaccctcttttaggtccatcagtaccaccctggcctccagcatcaag
agacgtaggtcctccaaagacacgcaattcccacccacagacattacgggccaactcaac
ttgtcagacccgtctgtcagcacggtggtgtga
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