Megalobrama amblycephala (Wuchang bream): 125252862
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Entry
125252862 CDS
T08212
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04080
Neuroactive ligand-receptor interaction
mamb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125252862 (gabra1)
04082 Neuroactive ligand signaling
125252862 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125252862 (gabra1)
Ion channels [BR:
mamb04040
]
Ligand-gated channels
GABA-A
125252862 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
125252862
NCBI-ProteinID:
XP_048022454
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Position
LG18:1072521..1105659
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AA seq
458 aa
AA seq
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MMWGGRGAAWLWIWACLLVTSVLAGKSSSQNADEQKDNTTVFTRILDSLLDGYDNRLRPG
LGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTKAEVVYVWTRGAAQSVVVADDGSRLNQYDLMGQTVDSGVVQSSTGEYVVM
KTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKES
LLKKNNTYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNSVSK
IDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGAVQPH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggggtggaagaggagcagcttggctttggatttgggcctgtttactggtgacc
agtgttctggctggaaaaagctccagtcagaatgcagatgagcagaaagacaacaccaca
gttttcaccaggattctggacagcctccttgatggctatgacaaccgtcttaggcctggt
cttggagagcgtgtaaccgaagtcaagactgacattttcgtgacgagtattgggccagtc
tcagaccatgacatggagtacaccatagatgtgttcttcaggcagagctggaaggatgag
aggctgaaattcaaaggtccaatggcagtgctccgtctcaacaatctcatggctagcaaa
atctggacccctgacacatttttccacaatggcaagaagtcagtcgcccataatatgacc
atgcctaacaaacttctacggatcacagaggaaggaactctgctttacaccatgaggctt
acagtcagagctgaatgtccgatgcacttagaggacttcccaatggatgcccatgcttgc
cctctcaaattcggcagctatgcctacacaaaggctgaagtggtgtatgtatggacacga
ggggcagcacaatctgtggttgtggctgacgatggctcccgcctcaaccagtatgacttg
atgggacagactgtcgactcgggtgtggtgcaatccagcactggagagtatgttgtcatg
aaaacacatttccatctcaaaaggaagattggttactttgtcatccagacgtatttgcca
tgtatcatgaccgtgatcctgtcccaggtgtccttctggctaaacagggaatctgtccct
gccaggactgtgtttggagtgaccactgtccttaccatgactaccctaagtatcagcgcg
agaaactctctccccaaggtggcctatgccacagccatggactggttcattgctgtttgt
tacgcctttgtcttctcggctctcatagagtttgccacggttaactacttcacaaagagg
ggttacgcctgggatgggaaaagtgtggtgccagaaaagcaaaagaagaagaaggagtca
ttgctgaaaaagaacaacacctacactgctgcaacagcaacagcttttgctccgaacatt
gccagagaccctggtttggcaactattgctaaaagtgccccccctcccccaaccgagccc
aaggaagagccgaaacccaaacctcccgaggcaaaaaagaccttcaacagtgtgagcaag
atcgataggattgccagaatagccttcccgttgcttttcggaacctttaacttagtgtat
tgggccacttacttgaataaaaaacccaaattacagggtgccgtgcaaccacactaa
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