Megalobrama amblycephala (Wuchang bream): 125253203
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Entry
125253203 CDS
T08212
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125253203 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125253203 (nup98)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125253203 (nup98)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125253203 (nup98)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125253203 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
125253203
NCBI-ProteinID:
XP_048023023
LinkDB
All DBs
Position
LG18:19097302..19120124
Genome browser
AA seq
1807 aa
AA seq
DB search
MFNKSFGAPFGGGTGAFGTSSTFGQQNTGFGAAGGFGSSAFGATNNTGGLFGATQNKPGG
LFGSSTFSQPVTSSTSTGFGFGATSGTSNSLFGSTNTGGGGLFSQQNNAFGANKPATFGT
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSSSFTAAPPGTTIKFNPPTGSDTMVKGGVT
TSINTKHQCITAMKEYENKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGPTAAATPSTGT
GLFGSSAPNTGFNFGQNKTSFGTSTGAFGTTTGNLFGQPPQQASSLFKPFGSATTTQNNT
FSFGNTNTMGQPNTSSMQGLFGNTAASQAGGLFGNTNTSTATGFGTGIFGQPNTGFGNVG
TQNLFGNKPAGFGTTTTSAPSFGTGTGLFANKPTLTLGTNTNTSTFGFGATGTGGGLFGN
KTATTGLGTGLGTGFGGAVGTGQTSLFGNNQNKLGSTLGSVGTFGTGGFNTGANTLNFGA
PQQPVALTDPSAAAAQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLKPTNPAAQ
KALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSLNNGAFMPRKSIKKLV
LKNLNNSSLYNNSGNREVDDLASPSEYPQNGLSLSMDEGETREVGVERSGEDDLEVSKFY
TNPITRPIPHTQPSPLLQDTISEFNMRGTGSHRNGLEASSEDISLAEDSIQEERDEELEA
QKPPHPAGIVLGRVGYYTIPSMEELGKMLNENGECIVENFTVGRKGYGSVFFSGEVNLTN
MNLDEVVHFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPNDKTTCCQIKSLERLTE
MNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEEVPPAKLDLKKLK
TGVPPGIPQLPLTQQQMAPQAQSTAVLELLSRVSELDSDMADITQEHPADSVLGEEDGER
TSVEEHKLRSETPAEHEPMSASSQIASSMGINPHTLQIMKASLFAEDDECDMFQEHGSSK
LIQDVASPKVLLSGAGRLSIGALLQTKFTSGGGLFSQFPEAPFGGIPQKISKSLASEAPW
PSLGPSFLLPAPPPEPTLRTIGARRLGGPVPLESSITLGKGRLLMDAALFRGRSFRVGWG
PNWTLVHCGDQVSVTETMKEQAAESMGFGFLPKPTKSKPITESLFKVRMEQVVGLEPKQS
AESLALYHRPLEISLKHSTINKDDPCPFIQPERGVDALHGYAEWIVEVNKDTGGDAGLAH
WRQVWTLCAALWGRLGDRDVETEQYSDYQQQLERRRSFSHWLSESSAECIEEEVGRALQR
NHAEAVFSYLTGHCLSKACKLSQKSGDHRLSLMLSQAVGSQFCRDLLALQLSDWNRMQTD
SFIEEERLRIFALLAGKPVWQSTDYCINVCSELDWKRCVAVHLWYMLPPTASVADALAKY
ESAFQGSEEVKRYACPPLPPYVDELELLGLDEEMDETESKKSLYDICFHLLKLYSDRHYS
LQQLLDPSTVTADHLDYRLCWHLWNVLQALNYNHLSTSCQGLLHTSYAAQLESAGLWEMA
IFVLLHIPDSGRRESAVREMLNLHCPLEETEESMEKEQFLTEKLLIPIQWIHQAKAIRAC
REGDKHREALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPERSVQIQS
WDTSGRVYLDYIHVIQTLQDIQQTESPGYELERLHTEVTSLCGRIELLPCSKAKDRLAQS
EMAKRVANILRVVLSLQQGGEGTPDPRHIPLCQLAPHIGRLPMPEDYALEELRSLTQSYL
QEYVISH
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcttttggtgctccctttgggggagggacaggagcatttgggacttca
tcaacatttgggcaacaaaatactggttttggagcagcagggggctttggatcttcagca
tttggtgcgacaaacaacacaggaggactattcggggccacccagaacaagcctggtggt
ctctttggctcgagcactttcagtcagcctgtcacctcctccaccagtactgggtttggg
tttggtgccactagtggcacatcaaacagcctttttggaagcaccaacaccggaggtgga
ggactgttttcccagcagaacaatgcctttggtgccaacaaaccagcaacttttggcact
tttggtaccagcactagtagcggtggattgtttgggacaaccaacacgacatccaaccct
tttggaggaacgtcaggctctttgtttgggtcatcaagtttcactgctgcaccacctggc
acaacaatcaaattcaatccaccaactggtagtgacacaatggtaaaaggtggtgtgaca
accagcattaacaccaaacaccagtgcatcactgcaatgaaggaatacgagaacaaatcc
ttagaggaattgaggtttgaggattatcaggctggaaggaagggtccttccaatcccatg
gcagctggcaccggtggtctctttggaccgacagccgcagctactcccagtactggcact
ggactctttggctcatcagctccaaacactggcttcaacttcggccagaacaagacctca
tttggcacgagcactggggcatttgggacaaccacaggaaatttgtttggccagccaccg
cagcaagcttccagtctcttcaaaccattcggctcagccaccaccacccaaaacaacact
ttctctttcggcaacaccaataccatgggccagcccaataccagcagcatgcaggggctg
tttggcaacacggctgcctctcaggccggaggactttttggaaacactaacacaagtacc
gccacaggctttggcacaggaattttcggtcaacctaacaccggctttgggaatgtgggt
acacagaatctttttggtaataagcctgctggatttggcaccaccaccactagcgcaccc
tcctttggcacaggcactggtctgtttgcaaataagcctacactcactctagggactaac
acgaacacttcaacctttggttttggtgcaactggtacaggtgggggtctttttgggaac
aaaactgctacgacaggactgggaacaggattgggaactggcttcggaggagctgtagga
actggccagacatcattgtttgggaacaaccagaacaagctgggctccactctggggtca
gtgggcaccttcggaactggaggcttcaacaccggagccaacactctgaattttggtgct
cctcaacaacctgtggctctgactgatcccagtgcagcagccgctcagcaggccgtcctc
cagcagcagattaacgcattggcctactctccatttggagactcacccctcttcagaaac
ccactgtcggatcccaaaaagaaggaagagcgtctcaagcccacaaatccagctgcccag
aaagccctgactacccctactcaatacaaactgacccctcgtcctgccacccgtgtgcgt
cccaaagctctctcctcctctggctcatccaaatctcagctcttcgatggacttgatgat
gatgaaccctctcttaacaatggagctttcatgcctaggaagagcataaagaagcttgtg
ttgaagaatctgaataacagcagtctgtataacaactctgggaacagagaggttgatgac
ttggcctccccttcagagtacccacaaaatgggctcagtctgagtatggatgaaggagaa
accagagaagttggtgtggagagaagtggggaggatgacctagaggtctccaagttctac
accaacccgatcaccagacccattccacacacccagccgagccccttgctacaggacacc
atctcggagttcaacatgcggggaactggcagtcatcgcaatggcttggaggccagcagt
gaggacatttctctggctgaggattccattcaggaggaaagagatgaggagctggaggct
cagaaacctcctcacccagctggtatagttcttggccgtgtaggctactacaccatccca
tccatggaagagctggggaagatgttgaatgaaaatggggagtgtattgtggagaacttc
actgttggcaggaaaggctatgggtcagttttcttctctggtgaggtgaatcttaccaac
atgaacctggatgaggttgtgcacttcaggcgtaaggagataatcgtgtacccggatgac
aaagacaagcctcctgttggagaagggctaaacagacgtgctgaagtgactctagatggt
gtgtggcccaatgacaagacaacgtgctgtcagatcaagagtctagagaggctgacagag
atgaactacgagggccgtctcgaggcagcatcgcgcaaacaaggcgcccgcttcttggag
taccgacccgaaactggctcctgggtctttgaggtggcccacttctcaaagtatggcctg
caggattctgatgaagaagaggaagtccccccggccaagctggacctgaagaagctgaag
acgggggttcctcctgggatcccacagcttccactgacccagcagcagatggcgccacag
gctcagagtactgcagtacttgagctgctcagccgggtgtcggagttggacagtgacatg
gctgacattactcaagagcacccagcggacagtgttttgggagaggaggatggagagaga
acttctgtggaggagcacaagctgagatctgagactcctgccgagcatgagcccatgtcc
gcatccagccagattgcttcctcgatgggcatcaaccctcataccttacagattatgaag
gcatctctctttgcagaggatgatgaatgtgacatgtttcaagagcatggttcttcaaag
ctcatacaagatgtggcttcccccaaagttttgctttctggagctggtcggctatcaatt
ggagccctgttacaaacaaagttcacctcaggtggagggcttttttcccagttcccagag
gctccttttggtggaatacctcagaagattagcaagtcactagcatctgaagccccatgg
ccatcattgggtccatccttcctgttgccggccccccctccagaacctacgcttcggacc
attggagcccgtaggctaggtgggccagtacctctggagagctctataactttagggaaa
ggccgtttactgatggacgcggctctgttcagagggcggtctttcagagtgggctggggt
cccaactggacactggtgcactgtggagatcaagttagtgtcacagaaacaatgaaggag
caggcagcagagagcatgggttttggtttcttacccaaaccaaccaagagcaaaccgatc
actgaaagtctgtttaaagtgcgtatggagcaggtggtcggcctggagcccaagcagtca
gctgagagccttgctctttaccacaggccactggagatcagtctaaagcacagcacaatc
aacaaagacgacccctgtcctttcattcagccagagagaggagtggatgctctgcatggt
tatgcagaatggattgtggaggtcaacaaagatacaggaggggatgctggcctggcccat
tggcggcaagtttggactttgtgtgctgctctgtggggtcgtctgggtgaccgagatgtg
gagactgagcaatactcggactaccagcagcagcttgagaggaggaggagcttctcacac
tggctctctgagagctcggctgagtgcattgaggaggaggtgggccgggcccttcagcgc
aaccatgctgaggctgtattcagttaccttaccggtcactgcttaagcaaggcctgcaaa
ctgtcccagaagagtggggaccatcgcctttcactgatgttgtctcaggctgtggggtct
cagttttgtagagatctattggctctgcagctcagtgactggaacaggatgcagacagac
tccttcatagaggaggagaggctgcgaatctttgctttgcttgcaggcaaaccagtgtgg
cagtcaacagactactgtataaacgtgtgctccgagcttgactggaagcggtgtgttgct
gttcatctctggtacatgctgcctcccactgcatctgtagctgatgctctcgctaaatac
gaatctgcatttcagggttcagaggaagtgaaaaggtatgcttgccctcctttacctccc
tatgtagatgaactcgagttgttgggtttggatgaagagatggatgagacggaatccaaa
aagtcactctatgacatctgcttccacctgcttaaactttacagtgacaggcactacagc
ctacaacagctacttgatcccagcacagtaactgctgatcatctggactaccggctgtgc
tggcacctgtggaatgtgttgcaggctcttaactacaatcacctgtccacctcatgccag
ggcttgctgcacaccagctacgctgcccagctggagagcgcaggattatgggagatggct
atcttcgtgctgctgcacatacctgactctggacgcagagagagtgcagtgcgggagatg
ctcaacttacactgcccccttgaggagacagaagagtcaatggagaaggagcaatttctt
acggaaaagttgctgatccccatccagtggatccatcaagccaaggccatccgtgcctgc
agagagggagataaacatcgtgaagccttgcacctttacaaggccggccactggaatcac
tgtcatcggctggtcatccaacacctggcctcagactgcataattaacgataatcataag
tacctgctggaattcctggagggtttggcagtgccagagcgcagtgttcagattcaaagc
tgggacacatctggacgggtctaccttgattacatccatgtcatccagactttgcaggac
atccaacagacggaaagcccagggtatgagctggagcgactgcatacagaggtgacatct
ctctgtgggagaatagagctcctcccctgctccaaagctaaagaccgacttgcccaatca
gagatggccaaacgtgtggctaacatcctacgagtggttttgagtctccagcagggtggt
gaaggcaccccagatccccgacacatccctctttgccagcttgctccacacattggacgt
ctacccatgccagaggactatgctttagaggaactccgcagccttactcagtcgtacctg
caagagtatgttatcagtcactga
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