Megalobrama amblycephala (Wuchang bream): 125253281
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Entry
125253281 CDS
T08212
Name
(RefSeq) vimentin isoform X1
KO
K07606
vimentin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125253281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125253281
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125253281
04147 Exosome [BR:
mamb04147
]
125253281
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125253281
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
125253281
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125253281
Exosomal proteins of other cancer cells
125253281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Baculo_PEP_C
CENP-F_leu_zip
DUF3450
DUF1664
DivIC
SlyX
bZIP_2
Tropomyosin
DUF7491
Prefoldin
Cep57_CLD_2
DUF4407
APG6_N
Phage_GP20
DUF7310
Laminin_II
PUMA_CC
DUF4349
DegS
ADIP
HAUS6_N
BLOC1_2
FlaC_arch
ZapB
TMF_DNA_bd
TPR_MLP1_2
Spc7
Motif
Other DBs
NCBI-GeneID:
125253281
NCBI-ProteinID:
XP_048023157
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All DBs
Position
LG18:complement(39259720..39290208)
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AA seq
403 aa
AA seq
DB search
MRGTTYSQKSLSVSGSSRMRVQSPSPSRCRGSSYSRGRTGFQGQAVEVATEIHQHHANEK
EEMQELNVRFAGYIEKVQALEQRNAALRAELESLQGRFKGGPTGLGEEYELKFKEVRDLI
EALTAEKGAADIERGYIEEEVEVWRLKLEEELAIKEEAEMILREFRQDVDNATLQKADLE
KRIEQLVAEIEFLKKLHDEEVADLLKQIEESKVTVELDSDRPDLAAYLRNMRAEIEAVAA
RNVQEAEKWYKGKFDTLKEQASKHEGHMKTMKDEITTFHNQVTDLQNQIDGLRARNAALE
QQLEDMEAAHLDKAAGLEDIIAQLESQLCETKMEMGKYMADYQELLHIKLKLDAEIATYR
KLLEGEEKRLGISVAEGLSGVAAVTEERTTSVSRTVETHTAVA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtacgacgtattcacagaagagcctgagcgtcagcggctccagccggatgagg
gtccagagcccgtcgccttcccgatgccgaggctcttcgtacagccgcggccggacggga
ttccagggtcaggcggtggaagtcgccactgagatccatcagcaccacgccaacgagaag
gaggagatgcaggagctgaacgtgcgcttcgccggatacatcgagaaggtccaggcgctg
gagcagaggaacgccgcgctgagagccgagctggaatcccttcagggacgctttaaggga
ggaccgaccggcctcggggaggaatacgaactgaagtttaaagaggtgagggacctaatc
gaagctctgaccgccgagaagggcgcggctgatatagagaggggctacatcgaagaagag
gtggaggtctggaggctgaagctggaggaagagctggccatcaaagaggaggctgaaatg
attctccgcgagttccgtcaagacgtcgacaacgccacgctacagaaggccgacctggag
aagcgcatcgagcagctggtggccgagatcgagttcctgaagaagctccatgacgaagaa
gtcgccgacctcctcaagcagatcgaggagtccaaggtgacggtggagctggactccgac
agacccgacctggccgcgtacctgcgcaacatgcgcgcggagatcgaggccgtggccgcc
cgcaacgtccaggaggccgagaagtggtacaagggcaagttcgacactctgaaggaacag
gccagcaaacacgagggccacatgaagaccatgaaggacgagatcaccaccttccacaac
caggtcacggacctgcagaaccagatcgacggcctgagggcgcgtaacgccgctctggag
cagcagctggaggacatggaggccgcgcacctggacaaggcggccggtctggaggacatc
atcgcccagctggagagccagctgtgcgagaccaagatggaaatggggaaatacatggcc
gactaccaggagctgcttcacatcaagctgaagctggacgcagagatcgccacctacagg
aagctgctggaaggagaggagaagcgtcttgggatctccgtcgccgaaggtctgtctgga
gtggcggcagtgacggaggagagaaccacgtctgtgtcccgcactgtagagactcacacg
gctgttgcctga
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