Megalobrama amblycephala (Wuchang bream): 125253310
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Entry
125253310 CDS
T08212
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03030
DNA replication
mamb03410
Base excision repair
mamb03420
Nucleotide excision repair
mamb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125253310 (rfc2)
03410 Base excision repair
125253310 (rfc2)
03420 Nucleotide excision repair
125253310 (rfc2)
03430 Mismatch repair
125253310 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mamb03032
]
125253310 (rfc2)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125253310 (rfc2)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125253310 (rfc2)
DNA replication proteins [BR:
mamb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125253310 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
125253310 (rfc2)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125253310 (rfc2)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125253310 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
125253310 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
AAA_18
MipZ
DNAX_ATPase_lid
ABC_tran
AAA_5
AAA_28
AAA_23
AAA_25
AAA_30
MeaB
NTPase_1
SLFN-g3_helicase
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
125253310
NCBI-ProteinID:
XP_048023189
LinkDB
All DBs
Position
LG18:complement(14013688..14019593)
Genome browser
AA seq
352 aa
AA seq
DB search
MDVEMKETDSEQSQADVQPKKDDTAPKTSTAYELPWVEKYRPLKLNEIVGNEETVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYSKLRDDQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNSG
FGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFRV
CKTFQMAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgagatgaaagagacagacagtgaacaaagtcaagccgacgtacagcctaaa
aaggatgatactgcgccgaaaacatcgactgcttatgaactaccatgggttgaaaaatac
agacctctgaagttgaatgaaatagttggaaatgaggaaactgtcagcagactggaggtg
tttgcaagagaaggaaatgtgcccaatatcatcattgctggtcctcctggcactggaaaa
actaccagcattttgtgtttggctagagctcttctcggcccggccatgaaagatgctgta
cttgagctgaatgcctcgaatgaccgtggtattgatgtcgtgagaaacaagatcaaaatg
tttgcccagcaaaaggtcacactccctaaaggtcgccacaagatcataatcttggatgag
gctgacagcatgacagatggagctcagcaggctctcagaagaaccatggagatatactcg
aaaaccacacgctttgcgctggcatgtaatgcgtcagataagatcatagagcccatccag
tcccgctgcgctgtgttgcgttacagcaaactcagagacgaccagatcatgatgcgtctg
acggaggtggtagagaaggagaacttacatgtcaccaacgacggccttgaggccatcatc
ttcaccgctcaaggcgacatgagacaggctctaaataacttgcagtcaacaaactctgga
tttggttacatcaacagtgaaaatgtgttcaaggtgtgtgatgagccacatcctctgctg
gttaaaagcatgctagaacactgtgtcaacgccaacattgatgaagcatacaagattatt
gagcagctttggtcactcggatactcaccggaggacataatcggaaacatctttagagtg
tgtaagacctttcagatggcagaatatttgaagctggaatatattaaggaaattggctac
acacatatgaaagtggcagaaggggtgaactctctgttacagatggctggtctgttgggg
cgactgtgcagcaagacggctgcaccggacgcaagctaa
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