Megalobrama amblycephala (Wuchang bream): 125253730
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Entry
125253730 CDS
T08212
Symbol
col8a1b
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
125253730
NCBI-ProteinID:
XP_048023728
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Position
LG2:24955761..24976985
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AA seq
736 aa
AA seq
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MNKKDMAGPLLSAHLFVLVEHLCLLHHIHAGAFYGHKPMPQQPLPQLPLLSHGNEGIPQH
HYHGKEMPHMPYGNEMPLLPQYGKERPQIPTHMGKPIVGKGETIPRGEKGPPGETGPMGP
PGPQGPPGLPGHGIPGPGGKPGPQGPPGLPGVGKPGMPGLPGKPGGIGLPGPKGELGPVG
GEGPIGMPGPPGHPGPHGLPGVAKPGGQGLPGQPGPRGEPGQKGFPGIPGLPGPKGENGI
GLPGLPGVKGPSGLPGQPGQVGLPGIGKPGLNGLPGAPGGQGKPGAPGEPGLAGVPGERG
QIGPPGLPGFGKPGLDGFPGKPGLPGGRGEPGPSGLPGGPGLPGFGKPGYPGPKGEKGHG
GLPGPQGPKGEKGHGGLNGMIGPPGPSGLPGPPGLMGPPGGIGFPGSKGEGGAVGPKGQL
GPKGEPGPPGHPGKPGFPGELGQQGPRGLPGPLGPKGENGHRGLPGLPGAPGKPGVKGED
GFPGEKGNPGPMGIPGLMGPSGPIGPPGLPGPKGEYGPPGKPGMPGEGKPGLPGPIGPPG
IPGMGGPPGQPGIPGPPGPPGLPGPPAQSQLFGQILPETGPGLDGAKSGYKKEKPGGAII
GRNGLEMPAFTAQLTTPFPPVGQPIVFNKILHNGNQNYNSQTGIFTCKIPGIYYFVYHVN
CKGNNVWVALYRNNEPVMYTYDEYKKSYLDQASGSAVLPLQVGDTVHVQLPSDQAAGLYA
GPYVHSSFSGYLLYPM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaagacatggctgggcctctcctctctgcccacttgtttgtactggtggag
cacttgtgtctgctacatcatatccacgcgggggcattttatggacacaagccaatgccc
caacagcctctgcctcagttacctctcctgtcacatggcaatgaggggataccccaacac
cattaccatggaaaggaaatgccacacatgccatatggaaatgagatgcccttgcttcct
cagtatggaaaagaacgtccacagatacccacgcacatgggtaaacccattgtaggaaaa
ggtgaaactattccaagaggagagaaaggtccccctggtgaaactggtccaatgggacct
ccagggccacagggacctcccggacttcctggccatggcatcccaggacctggaggtaaa
cctggtcctcaaggtccaccaggactccctggagttggaaagccaggaatgccaggtttg
ccaggaaaacctggtggtataggtttaccaggaccaaagggtgagttggggccagttggt
ggtgaagggccaatagggatgccaggacctccaggtcatccaggaccacatggcctacca
ggtgtggcaaaaccaggtggacaaggacttccaggacaacctggtcctcgtggagaacct
ggacaaaagggattccctgggatccctggcctcccagggccaaaaggtgagaatgggatt
ggtctcccaggactgccaggtgtaaagggaccttctggacttccaggacaaccaggtcaa
gtaggactaccgggaattggcaagccaggactgaatggactacctggggctcctggaggg
caaggtaaacctggtgcacctggagaaccaggattggcaggagtcccaggggagagagga
caaataggaccaccaggactaccaggctttggaaagcctggtttggatggttttccaggg
aaaccgggtctcccaggtggaaggggcgaaccaggtccttctggtttacctgggggccca
ggcttgcctgggtttggcaagcctggatatcctggccctaaaggtgaaaaggggcatggt
ggtttgcctggccctcaaggcccaaaaggtgaaaagggtcatggtggccttaatggaatg
attggaccgccagggccaagtggcctcccaggtcctccaggtctgatgggaccccctgga
ggcattggtttccctggttcaaaaggagagggcggtgcagtaggacctaaaggacaactg
ggtccaaaaggtgaaccaggacccccaggacatccaggcaagccaggattcccaggagaa
ttggggcaacaaggacctagaggcttgcctggtcccttaggacctaaaggtgaaaatgga
cacagaggcttacctggcctacctggagcccctgggaagcctggtgtaaaaggagaagat
ggatttccaggagagaaaggtaatccagggcctatgggaatcccaggattaatgggtcca
tcaggaccaataggcccacctggtctaccaggcccaaaaggggaatatggcccaccagga
aaaccgggaatgccaggtgagggaaaaccagggcttccaggcccaataggtcctcctggt
atacctggaatgggtgggcccccaggtcaacctggaatacctggtcctcctggcccacct
ggcctacctggacctcctgctcaatctcaattattcgggcaaatccttcctgagacaggt
cctgggctagatggggcaaaaagtggttataagaaagaaaagcctggaggagccattatt
ggtaggaatggcctagagatgccagcatttacagctcagctgacaaccccattccctcca
gttgggcaacctattgtcttcaacaagattttgcataatggcaaccagaattacaactct
caaaccggcatattcacttgcaaaatacctggaatttactactttgtctaccatgttaat
tgcaaaggaaacaatgtatgggtggccttatacaggaacaatgaaccagtaatgtataca
tatgatgaatacaaaaaaagttacctggatcaggcatcagggagtgcagtgctgccctta
caagttggagacactgttcatgttcagttgccatcagaccaagctgcaggactttatgct
ggtccatacgtccactcatcattctctgggtatttgttatatcccatgtga
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