Megalobrama amblycephala (Wuchang bream): 125253752
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Entry
125253752 CDS
T08212
Symbol
edc4
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125253752 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125253752 (edc4)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125253752 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
125253752 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_EDC4L
WD40_Prp19
Pdc1_Ge1
WDR55
EIF3I
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
125253752
NCBI-ProteinID:
XP_048023780
LinkDB
All DBs
Position
LG19:complement(13747692..13776430)
Genome browser
AA seq
1396 aa
AA seq
DB search
MASNSNMDIEGATQHLRDILKLDRPGNSAETSLVESQRNLSFNGELNGVLGADIIGAGGH
AAMVEPTSHNSDKLNGQDTQTICLSGDDESTCVSIRANNVEIVSSRDSSIDSKARGSNKV
KIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLQLGSTERSLLKGFTGAV
TDLAFAHLDSTLLGCVDEAGNMFIWQLTSHSNKIQDEVVVHIRRPEDTPLNSNRRLIWCP
FIPEDNDENPEDACQTLALLHEDRAEVWDLDILRSNNSSWPVDATELKEGFITIRGHTAR
ISEGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPFNSSVLPSLKASLDLSAEF
LILSDVQRKVLYVMELLQNQEKGRASFTAVSEFLLTYPVLSFGVQDVARARLRHTEVLPP
DEESESMTTEGSQGPSESKSGIQIKLYCVHTKSLQDVQIWFQPNQGASSSLFMPQSGSQD
GFGFSDPLADLNVEAMSSDKESGDSGSQNDLSKILPLPSPADFMSPAPSALPKLMTPDAF
MTPSTSMPASPGSSASSLTIVTAMSSSDSGARGGDDLAQSPKMSVECGNSSLTLSANAGS
PRSNSILISGLGENIQVLMDMVSSPNPPLSLDLQSIEPMVVPQASPTRARSPDVISSAST
AMSQDIPEIASETLQRGLASAACXFVPVLHSDSMASAASVLHLLSPRARSSAEHSLLPLE
LGAASVDGEQRLNNTPSLLETALSQEKRCSGWGSCSDSSVNHAWPAAPDITRETRNSLRD
NGLGDCSREEIKDRHISSPYHRRTYHLTQNDSQDASAEQSDHDDEVASLASSSGNCGPRS
SHRLPVKDWKTSPRSSPKLKRKSKKDEGESSQSRQLENQMSTEVQDELLQMLRSQQRELA
ELRQNQLDLLQRVTSHMDAIQSSIMAHIEHSMLAQQEQEQRRMERILAEGQSRNQQLQDQ
LVQQLVQTLNNSLCNRLDKVLREEMKKIVPQSISKSLEPLTGQMSSTIAAKLTAVEGTLK
ENVTKVVKSKNTTDAIGRAAAEAMQGPIQAAYKETFQSIVLPVFERGCQSMFQQINDSFK
QGTHEYIQQLETHIKNRKQRDQDARDPVIGQLQQMIDTLQNSQDQLASTVTASVCSDVQH
QLHMIVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPSTHLDYQ
AQQASILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQVFSQQPCPLHQAVLLSLI
QQLSTNLSSRTELKISYLEDAVMNLDHGDPVTRDHMSAVLTQVRQKLFHFLQQDAHSPLS
KRARRLMMMLQGLVNH
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaattccaatatggacatagagggcgcgacccagcaccttcgggacatctta
aaactggatcgtcccggtaattcggccgagacctctttagtggagagccagagaaatcta
tctttcaatggggagttgaatggagttcttggagcggatattatcggagcaggaggacat
gcagcaatggtggagccgacttctcacaactctgacaaactcaatggacaggacacacag
accatctgcctttcaggagatgatgagtccacctgtgtctccatcagagcaaacaatgtg
gaaattgtgtccagccgtgactctagtattgacagtaaagctcgtggtagcaacaaggtt
aaaattcagccagtggccaaatatgactgggagcataagtactactatggcaatttaata
gccgtgtccaactcatacttggcttatgccatcagaggtgcaaacaatcattcaatgatc
cgtgtgctgcaactgggctcgacggagcgttcgctgctgaagggcttcaccggtgcggtc
acagaccttgccttcgcccacttggactccaccctcttgggctgcgtggatgaggctgga
aacatgttcatttggcagctcactagtcacagcaacaaaatacaagatgaagtggttgtt
cacatccgtaggcctgaggacactccacttaattccaaccgcagactcatctggtgtccc
ttcatcccagaagacaatgatgagaacccggaggatgcatgtcagacattggcactgctt
catgaagacagagctgaggtttgggaccttgacatcctccgatccaataacagctcatgg
cccgtggatgccactgaactgaaagagggattcatcaccattagaggacacacagcacgc
attagtgagggagcgctgtcccctgatggcactgtcttggccacagccagtcatgatgga
tatgtcaaattttggcaaatctacattgaaggacaggaccaacccagatgtttgcatgaa
tggcagccacataatggacgtccactttcctgcctgctcttttgtgacaatcacaagaag
caagacccagaagttccattttggcgcttcctgatcactggagctgatcagaaccaggag
ctgaagatgtggtgcacagtgtcatggacctgcttacaaaccatcaggttttctccagat
ccatttaacagcagtgtgctacccagcctgaaggccagtttggacctgtctgcagagttt
cttattcttagtgatgttcagaggaaggtgttgtacgtcatggagctgctacagaaccag
gaaaaaggtcgtgccagcttcactgcagtttcagagtttctgcttacatatcctgtgctc
agcttcggtgtacaggatgttgcccgcgcccgactgcgccacactgaggtccttccccct
gatgaggaaagtgaaagcatgacaacagaaggaagccagggaccctcggaatccaaatca
ggaatccagattaaactctactgtgtgcatacaaaatcgctacaggatgtgcagatctgg
ttccagcccaatcagggggcctcatcctcccttttcatgcctcagtctggatcccaggat
ggctttggtttttctgacccgctggccgatctgaatgtggaggcaatgagctctgataaa
gagtctggtgacagtggatcacagaatgacttgagtaaaattctgcctcttccaagtcca
gctgacttcatgagtccagccccatcagccttgcccaaactcatgaccccagacgccttt
atgacgcccagcacctctatgcccgcctctcctggcagcagtgcgagcagcctgaccata
gtcacggccatgagcagctcagacagcggtgcaaggggcggagatgatctggcccagagc
cctaagatgtctgtcgaatgtggcaacagcagcttgactctgagtgccaatgcaggcagt
ccaagatccaactccattctcatctcaggccttggggaaaacatccaggtattaatggac
atggtttcctctccaaaccctcctctctccctggatctccagtccatagagcccatggtt
gtccctcaagcctctccgaccagagctcgctctccggatgtcatttcctctgcttctacg
gcaatgtcccaggacatccccgagatcgcctcggagaccctgcagaggggactggccagt
gccgcttgctgattcgtccctgtcctgcattctgacagcatggcatcagccgcatcggtc
ctccacctgctgtctccaagagcccggagcagtgctgagcacagtttgctgcctctcgaa
ttgggtgcagcatctgtggatggagaacagagactcaataacacaccctccctactggag
acggctctgtcacaggagaaacgctgtagcggctggggttcttgttctgacagcagtgtg
aaccatgcctggccggcagcacccgatatcacacgagaaactcgcaacagcctgagagac
aatggtttgggagactgctctagggaggaaataaaggacaggcacatttcttctccctac
cacagacgcacctatcacctgactcagaacgacagtcaagatgcaagtgcagagcagagt
gatcatgatgatgaggttgccagtctggcctcctcctcggggaactgtggcccccgctcc
tcgcacagacttcccgtaaaggactggaaaacatcaccccgcagctcccccaagctcaag
aggaagagcaagaaagatgaaggagagtcctcccagtctagacagcttgagaaccagatg
agcacagaggtgcaagacgagctcctgcagatgttgcggagtcagcagagggagttagca
gagctgagacagaaccagctggaccttctgcagagagtcaccagccacatggatgccata
cagagctccatcatggctcacattgagcactccatgttggctcagcaggagcaagaacag
agaagaatggagcgaatcctggctgagggacaaagccggaaccaacagcttcaggaccag
ctggttcagcagcttgtccagactctgaacaacagtctgtgcaaccggctagacaaagtt
ttacgtgaagaaatgaagaagatcgtcccacagtccatatcgaagagtctagaacctttg
actggccagatgagcagcaccattgctgccaagttaaccgcagtggaaggaacactgaag
gaaaatgtcaccaaagttgttaagtccaagaacactacagatgccattggtcgtgctgct
gccgaggccatgcagggccccattcaggcagcatacaaagagaccttccaaagcattgtg
cttcccgtgtttgagagaggctgccagtccatgtttcagcagatcaatgacagcttcaaa
cagggaacccatgagtacatccaacagctggagacacacatcaagaacaggaaacagcgg
gaccaggatgcacgggatcccgtgattggccagctgcaacagatgattgacacgctccag
aattctcaagaccagctggccagcactgtgacggccagtgtgtgctctgacgttcagcat
cagctccacatgatcgtgggaaatctgcaagactcaatcctgacgcaggtgcagcgcata
gtgaagggagaagtgagtctggccatgaaggagcagcaggcagccgtcacctccagcatc
atgcaggccatgcgctcggctgcaggaacacctgtcccctccacacatttggactatcag
gcccagcaggccagcatactgcagttactacagcagggccagctcaacgaggccttccaa
caggctttatccgcagcagacctgaatctggtgctgtacgtgtgcgagaccattgactct
cagcaagtgttcagccagcagccctgtccactccatcaggccgtcctcctgtctctcatc
cagcagctctccaccaacctgagctcacgcacagaactcaagatcagctatctagaagat
gctgtgatgaacctggatcatggagatccagtcaccagagaccacatgtctgcagtgctg
acccaggtacgacagaagctcttccatttcctgcagcaggacgcccacagccctctgagc
aagcgtgcacggcgcctcatgatgatgctgcagggcctggtcaatcactag
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integrated database retrieval system
