Megalobrama amblycephala (Wuchang bream): 125253827
Help
Entry
125253827 CDS
T08212
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125253827 (ctcf)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125253827 (ctcf)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125253827 (ctcf)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125253827 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
125253827
NCBI-ProteinID:
XP_048023959
LinkDB
All DBs
Position
LG19:13992004..13999247
Genome browser
AA seq
823 aa
AA seq
DB search
MDTYGSANSTLLFTICKVDSSLSECVYVLPMEGGPTEAVVEDAGDAFKAKECKTYQRRRE
DEEVGAELLQAAGLEQAQVEGEPVVEAQQQLVESVVNVNSSVEMMVMDSLDPALLQMKTE
VMEAAVGAPVGAAHEATVTTVDDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTAAT
VEELQGTLVDATAMPKDGEPVICHTLPLPEGFQVVKVGANGEVETVEQDELQAQEDQPPQ
QEEEEMAEAQNEDPTWSKDPDYTPPVKKVKKTKKSKLRYNTEGDKDMDVSVYDFEEEQQE
GLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPH
KCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCS
MCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHA
RFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCDA
VFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSQCEKTFRQ
KQLLDMHFRRYHDPNFVPTSFVCTKCGKTFTRRNTMARHAENCTGMDSTDGENGAPPKRA
RGGRKRKMRSRKDDDDDDSDEHGDPDLDDIDEEEEDEPLDDEQMDVEQAPPSVPIPAPAE
PPVKRKRGRPPKNAAKASPTKSIAKTTTAAAAIIQVEDESTGAIENIIVKKEPEGSDAVV
AAQPVVEEVEAVEAGVETVQLAVPEAAPNGDLTPEMILSMMDR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatacctatggaagtgccaactctactcttttgtttaccatttgcaaggttgatagc
agcctgtctgagtgtgtgtatgtattacccatggaagggggaccgactgaggcagtggtg
gaagatgctggggatgctttcaaggccaaggaatgcaagacataccaaaggcgtcgagaa
gatgaggaagtgggagctgaattgctgcaggctgctgggttagagcaagcccaagttgaa
ggagagcctgtggtggaggcccagcaacagttggtcgagagtgtagttaatgtcaacagc
agtgtggagatgatggtgatggactccctggaccctgccctgctccagatgaagacagaa
gtcatggaggctgctgtcggagcacctgttggtgctgcccatgaagccactgttacaact
gtcgatgacactcagatcatcaccctgcaggtggtgaacatggaggagcagcagttgggc
ttgggagagctgcagctagtgcaggtgcctgtttctgctgtgcccgtcactgctgccact
gtggaagagctgcaagggacactggttgacgccactgccatgcctaaagatggggagccg
gtcatctgtcataccctgcctttgccggagggcttccaggtggtcaaggtgggtgcaaat
ggagaagtggaaactgtggagcaagatgagctccaggcccaagaggatcagcctccacag
caggaggaggaggagatggctgaagcccaaaatgaagaccccacatggtccaaagatcca
gattacacaccccctgttaaaaaggttaagaagactaagaaaagcaagctgcgctacaac
acggagggcgataaagacatggatgtgtctgtgtatgactttgaggaggagcagcaggag
ggactgctctctgaagtcaatgctgagaaagttgtgggtaacatgaaaccgcccaaacca
actaaaatcaagaagaaaggtgttaagaagacattccagtgtgagctgtgcagttacacc
tgtccgcgccgttccaatctggatcgccacatgaagagccacacggatgagaggcctcac
aagtgccatctttgtggacgagccttcaggactgtgacgttgctgaggaaccatctcaac
acccacacaggcaccagaccacataagtgtactgactgtgacatggcctttgtcaccagt
ggagagctggtgcgacacagacgctacaagcacactcatgagaaaccattcaagtgctcc
atgtgtgactatgccagtgtcgaggttagcaagctgaagcggcacattcgctcccacact
ggagaacgtccgttccagtgcagtctgtgcagctatgccagcagagatacctataagctt
aagagacatatgaggacccactcaggagagaagccctatgagtgctatatctgtcatgct
cgttttactcagagtggtactatgaagatgcacattctgcagaagcatacagaaaatgtg
gcaaaatttcactgcccccactgcgacacagttattgctcgcaagagcgatctcggtgtg
cacctccgtaagcagcattcctacattgagcagggcaggaagtgtcgttactgtgatgcg
gtgttccatgagcgctacgctctcatccagcatcagaagtctcacaaaaatgagaagcgc
ttcaagtgtgaccagtgtgactatgcgtgccgtcaggagcgtcacatggtcatgcacaag
cgcacccatactggggagaagccatacgcctgcagccaatgtgagaagactttcaggcag
aaacagctcctggatatgcactttcggcgctaccatgaccccaactttgtacccacatcc
tttgtttgcaccaagtgcggcaagaccttcactcgcaggaatactatggccagacatgca
gagaactgcactggtatggattctactgatggagagaatggagctccacctaaaagggct
cgtggtggcagaaagaggaagatgcgctctagaaaggatgatgatgacgatgatagcgat
gagcatggagatcctgaccttgatgacattgatgaagaagaagaggatgagcctcttgat
gatgagcagatggatgtggaacaggctccacccagcgttcccatccccgcaccagctgaa
cctcctgtcaagaggaaacggggcagaccccccaagaacgcagccaaggcttctcctaca
aagtctatcgccaaaaccaccacagcagctgctgccattatccaggtggaggatgaaagc
acaggggccattgagaacatcattgtgaagaaggagcctgagggctctgatgcagttgta
gctgcccagccagtggtagaggaagtggaggcagtcgaagcgggtgtagaaacagtgcag
ctagctgtccctgaagctgcaccgaacggtgatcttactcctgaaatgatccttagcatg
atggaccggtga
DBGET
integrated database retrieval system
