Megalobrama amblycephala (Wuchang bream): 125253959
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Entry
125253959 CDS
T08212
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125253959 (chd2)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125253959 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
125253959
NCBI-ProteinID:
XP_048024192
LinkDB
All DBs
Position
LG19:complement(15614713..15660353)
Genome browser
AA seq
1810 aa
AA seq
DB search
MMKNKSKKQEDEGSTQSNASSNSASEESNRSGSESGSQSESEQGSDRARSRRSESNSTSD
SESHFESGSESTGSKSRQTSAQAKDKPVRKKDNLADVKKVQKQMWEEHPDIYGVRRSSRS
RQEPARLNIGAEGSSDSEGESPKRKSSRQKKKENTWKDDDSKDEEDVEEEASSSESEQEE
KKVRSRRLPARRPQTKSSASKQQPQKGRKQRKQESSDEEDEDDDDDEEEEEDTPKRQTRR
RTATKVSYKEDQNDFETDSDDLIEMAEGAEEQQDDDSETIEKVLDTRIGKKGATGASTTL
YAIEENGDPGADFDPEKEEGETQFFIKWKGWSYIHNTWESIDSLTQQKVKGIKKIENFKK
KNDELNAWLRKASPEDLEYYNCQQELTNDLSKQFQIVERVIATRTGKSQAHSDFPSHKTA
STEPEYLCKWMGLPYAECTWEDGALITKKFQACVESFQHRNACKTIPSKDCKVLKQRPRF
VALKKQPSYIGDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLF
HQHQLYGPFIVVVPLSTLTSWQREFETWAPDMNVVVYLGDVTSRKTIRDYEWIHQQTKRI
KFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGT
PLQNSLKELWSLLHFLMPDKFESWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEK
SLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFL
IKQPEEVENEKAQEHLQSLVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILADYL
SMKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDS
DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKNTVEEDIIERAKKKMVLDHLVIQRMDTTG
RTVLDNNSANSNSNPFNKEELTAILKFGAEDLFKEPEGEESEPQEMDIDEILRLAETRES
DQGSSATDELLSQFKVANFTMDESTPDLEERAVRDWDDIIPEEQRKKVEEEQKQKEMEDI
YMLPRSRSSNKKAQANDSDSDVGSKLKNRSSGSDSETDDSEDDKRPKRRGRPRARKNNVE
GFTDAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNSCVTAVQEHE
EHMKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKSVPPNPAERSKFQLT
CRVKTPHFDVEWDIHDDTQLLLGIYEHGYGNWDLIKTDPDLKLSEKILLDDPDKKPQGKQ
LQMRADYLLKMLKKEQESQDAIKAGDEPKTKKRKPRIKNKAPNNDLVNEIASPRLSDNPS
EEGEVKDDGAEKSPTKKKQKKDNKENKEKTGTTKKEKEGDKDKRRSKSKKEKAKPGGKGK
KAQGPVHITAGSEPVPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQ
HTRTCLLKIGDRITECLKSYNDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRS
QEEEKEHRKKDDPARKKPFRPEPSGSSRDSTGAQPTTKPHPPVNHPPGPPPHAHHREQYN
QPNKRHFPNDDRGEWQRDRKYSYPGNSNQPWQGDRHHPYEPHRYKDHHYGDRRPHDYRSG
GYRNSGSPRKRPYDQYGNDRDHRGHRDYYDRHPDPKRRRSDEYRSPNYHQGGGGHPQDFR
RMPDHRGPPGNHGPMGPDHYRPFHPDKPPPLIDPRSPQSQKSPLESISPALDRTAEQKPV
TDFNWNNRKT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagagtaaaaagcaggaagatgaaggctcaactcaaagcaatgcttcc
agcaattctgcatcagaggaatctaaccgctcgggatcagagtccgggagtcagtcggag
agcgagcaaggaagtgatagagctcgttcccggcgttccgagtccaacagcacctccgat
tctgagagccactttgagtcagggagtgaatccactgggtccaaatcccgtcagacctca
gcacaggccaaagacaaaccagtccggaagaaagacaacctggcagacgtgaagaaggta
caaaaacagatgtgggaggaacatccagatatttatggtgttagaagatccagtcgcagc
agacaagagcctgcccgcctcaacatcggagctgagggcagcagtgattcagagggggaa
agtcccaaaagaaaaagctcacggcagaaaaagaaagaaaatacctggaaagatgatgac
tcaaaagacgaagaggatgttgaggaagaggccagcagttcagagagtgagcaggaagag
aaaaaagttagatccagacgacttcctgctagaagaccacagaccaaatcatctgctagc
aaacagcagccacaaaagggccggaaacagaggaagcaggaatcctcagatgaagaagat
gaggatgatgatgatgatgaggaagaggaggaggataccccaaagagacaaacaaggcgg
cgaacagcaactaaagtcagttacaaggaggaccagaatgatttcgagacagactctgat
gaccttatcgaaatggcagaaggagccgaggagcaacaggatgacgacagtgagaccatc
gagaaggtccttgataccaggattggcaagaaaggagctactggagcttccacaaccctc
tatgctattgaggaaaatggggaccctggagcagactttgatcctgagaaagaggaaggg
gaaactcagttcttcatcaagtggaaaggctggtcctacatccacaacacctgggagagt
atcgattccctcactcagcagaaagtcaaagggataaagaagatagaaaacttcaagaag
aaaaacgatgagcttaacgcttggttgaggaaagcgtcacctgaagatttagaatattac
aattgccagcaagaactaaccaatgacctgagcaagcaattccagatagtagagagagtg
atcgcgacaagaacggggaaatcacaagcacattcggattttccctcccataaaaccgct
tccactgagccagagtacctgtgtaagtggatggggctgccgtatgcagagtgcacatgg
gaggatggcgcattaatcacaaagaaatttcaggcttgcgttgagagtttccaacacaga
aatgcctgtaagacaatcccctccaaagactgcaaggtgttgaaacagaggccaagattt
gtggccttgaagaagcagccttcttatattggagatgagaaccttgaactcagagattac
cagttagatggagtgaactggctggcacactcctggtgcaggtgtaacagtgttatcttg
gctgatgaaatgggcctgggaaagaccattcagacgatctccttcctgtcctaccttttc
catcagcaccagctttatggtcccttcatcgtggtggtgcccctgtcaacccttacctcc
tggcagagggagtttgagacttgggccccggatatgaatgtagtggtgtatctgggagac
gtcacaagtagaaagacaatccgggactatgaatggatccaccagcagacaaaaaggatc
aagttcaatgcacttttgaccacatatgaaattctactgaaggacaagggagtgctgggg
aatataaactgggctttcctcggagttgacgaagctcaccggcttaagaatgacgactcg
ctgctatataaaactctgatcgactttcgatccaatcacaggctgctcattactgggacc
ccactgcagaactcactcaaagagctgtggtcccttctgcactttcttatgcctgacaag
tttgagtcctgggaggattttgaggatgagcatggtaaaggcagggataatggttatcag
agccttcataaagttctggaacctttcctactgcgtcgtgtcaagaaagacgtggagaaa
tccttgccggctaaagtggagcaaatcctcagagttgacatgtccgcccagcaaaaacag
ttctacaaatggatactaacaagaaactacaaagccttgtccaaaggcaccagaggcagc
tcttctggctttcttaacattgtcatggagctgaagaagtgttgtaaccatggtttcctc
atcaaacaaccagaggaggttgagaatgaaaaagcacaagagcacctacagagcttggtg
cgtggcagtgggaaactggttctcctggacaagcttctcacacgactgagggagagaggc
aaccgtgtgctcatcttctctcagatggtccgcatgttggacatccttgctgattacctg
tctatgaaacgctatccattccagcgtttggacggctccatcaagggagagatccgaaaa
caagcactggaccactttaatgctgaaggctctgaggacttctgttttctgctgtccacc
cgagctggaggtcttgggattaacctggcctctgccgacacagtggttatctttgactcg
gactggaatccacagaatgatcttcaagcccaggccagagcccacaggattggccagaaa
aagcaagtgaatatctatcgtctggtcacaaaaaacactgtggaggaagacattattgaa
agagcaaaaaagaagatggttctagaccatcttgtcattcagagaatggacacaaccggg
cgaaccgtattagataacaactctgcaaattcaaattcaaatcccttcaataaagaagaa
ctgacagccatcttgaagtttggagcagaggatctgttcaaggaacctgagggagaggaa
tcagaaccgcaggaaatggatattgatgagatcttgcggcttgctgaaaccagagagagt
gatcagggatctagtgccacagacgagcttctgtcacagtttaaggtggctaactttacc
atggatgaaagcacaccagatcttgaggagagggctgtgcgtgactgggatgatataatt
ccagaggagcagcggaagaaggtggaggaagagcagaagcagaaggagatggaagacatc
tacatgctgcccagaagcagaagctccaacaagaaggcgcaggccaatgacagcgacagt
gacgtgggatccaaactgaagaacagatcctcaggttcagatagcgaaacagatgacagc
gaggatgacaaaaggcccaagcggagaggcaggccgagagctcgcaaaaacaatgtggag
ggatttactgacgcagagatccgcaggttcataaaggcatacaagaagtttggagctcca
cttgagaggttggaggcgattgcccgtgactctgagctggtggataagtccattgcagat
ctgaagcgactgggggaactggtacacaacagctgtgtgactgcagtacaggagcatgag
gagcacatgaaagaaaaccctgtggaagctaaagggccagggaaaagacgaggcattaac
ataaagatctctggagttcaggttaatgcaaagtccattatccagcatgaagaggagttt
gaaccgctgcataaatctgtgcctccaaatcctgctgaaaggagcaaatttcagctgacc
tgtcgggtgaagactccacactttgacgtagaatgggatattcatgacgacacacagctg
ttattgggtatctatgagcacggctacggcaactgggacctgatcaagaccgatcctgat
ctcaaactttctgagaagattctcctagatgaccctgataagaaacctcagggaaagcag
ttacagatgcgagcagactacttgcttaagatgctgaagaaagagcaggaaagccaagat
gctattaaagcgggagatgagcccaaaaccaaaaagaggaaacctcgaatcaagaacaag
gcccctaacaatgatctggtcaatgaaattgcctctcctcgtctctccgacaacccatca
gaagagggagaggtgaaggacgatggagctgaaaaatcacccacaaagaagaaacagaaa
aaggataacaaagagaacaaagaaaaaacaggaactactaaaaaagaaaaggagggggac
aaagacaaaaggcgctccaagtccaaaaaagagaaggccaaaccaggaggaaaaggaaag
aaagctcagggccccgtgcacattactgcaggaagtgagcctgtaccaattggagaggaa
gatgatgagctggaccaggaaacattcagcatttgtaaagagcggatgaggccagtgaag
aaggctctgaagcagctggataagccagatgaggggctgtcagtgcaggagcagctgcag
cacactcgcacctgcctgctgaagattggagaccgcattacggagtgccttaaatcgtac
aatgaccctgagcacgtcaagacctggcgcagaaacctctggatttttgtgtccaaattt
actgagtttggcgcccggaaactgcacaagctgtataagatggctcaaaagaagcgctcg
caggaggaagagaaagagcataggaagaaggatgatcctgccaggaaaaaacccttcaga
cctgaaccgtctggatctagtcgagattctacaggtgcccagcccacaaccaaaccccat
cctccggtcaaccatccgcctggacctccccctcacgcccaccacagagagcaatacaac
cagcccaataaaaggcactttcctaatgatgataggggagaatggcaaagggaccgtaaa
tacagctacccaggtaacagcaatcagccctggcaaggggatcggcatcacccatatgag
cctcataggtacaaggaccatcactatggcgaccgtcgtcctcatgactaccgctcagga
ggttaccgtaacagcggttcccctcgcaaacgaccctatgaccagtatggtaatgataga
gatcatcggggccatcgagactattatgacagacatcctgaccctaagaggaggcgttcg
gatgagtaccgctccccgaactaccaccaagggggaggagggcatccacaggacttcaga
aggatgcctgaccaccgaggaccccctggaaaccatggccccatggggcctgatcactac
cgccccttccacccagacaaacccccacccctgattgacccccgttcccctcagtctcag
aaatccccacttgagtcgatctcgcctgctttggatagaactgcagagcagaaacctgtg
acggactttaattggaacaacaggaagacgtga
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integrated database retrieval system
