Megalobrama amblycephala (Wuchang bream): 125253987
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Entry
125253987 CDS
T08212
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03420
Nucleotide excision repair
mamb04115
p53 signaling pathway
mamb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125253987 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
125253987 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
125253987 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125253987 (ddb2)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125253987 (ddb2)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125253987 (ddb2)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125253987 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
EIF3I
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
125253987
NCBI-ProteinID:
XP_048024243
LinkDB
All DBs
Position
LG19:12823251..12833333
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AA seq
505 aa
AA seq
DB search
MARGRAQTDSTASKQMKNVNSKKRPNEEPPQTLSKKLKAKQQAKTSSKTETYIQASVKWT
GGQKKVGQTSILHYIYKSSLGQSIHAQLRQCLQEPFVRSLGTYKLHRTASPFDRRVTCLE
WHPTHPTTVAVGSKGGDIILWDYDVLNKRTFIQGKGAGDFIGEMKFCPTDVSKIFVASGD
GTISVQSFEGLQSQILSRTPDCGHDHHDLCYWYCCVDVSVSRQMLATGDNTGRLLLLGLD
GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKSSYIAEMPHEKPV
NSAYFNPTDSTKLLTTDQRNEIRVYCSYDWSKPDQIIVHPHRQFQHLTPIKATWHPMYDL
IVAGRYPDDQVLVNDKRTIDIYDANSGDLVHQLRDPNAAGIISLNKFSSNGDVLASGMGY
NILIWNREDTLNSINRKQAAERVESGGRAGTSRSQRSTQQRTNRGGRAAADDAKLKKKLA
SLSSTETKSKTKSKTECKTSKLKKK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaggaagggctcagacagactcaactgcttcgaagcagatgaagaacgtcaat
tcaaagaaaagaccgaatgaagaacctcctcaaacactctccaaaaagctcaaagccaaa
cagcaagccaagacatcatcaaaaacagaaacctacatacaagcaagtgtgaaatggact
ggaggtcaaaagaaagtgggccaaacaagtatccttcactacatttacaaaagctcattg
ggacagagcatccatgctcaactgcgccagtgtctgcaagagcctttcgtacgctcactt
ggaacctacaaacttcaccgcacagccagtcccttcgaccggagagtcacttgtctggaa
tggcatcccacccatcccactactgttgcagtgggatccaagggtggagacatcatcctg
tgggattacgatgtgctgaataagagaactttcatacaggggaagggagcgggtgacttt
attggggagatgaagttctgccccacagatgtgtctaaaatctttgtcgcttctggtgat
ggcacaatcagcgtgcagagttttgagggcctccaaagtcagatattgtctcgaacccca
gactgtggccatgaccaccatgatctttgttactggtactgctgtgtggacgtgtccgtt
agccgtcagatgcttgcgactggggacaacactggaagacttctcctgcttggcctggat
ggacatgagattttcaaagaaaagctgcacaaagccaaggtgacccatgcagaattcaac
cctcgctgtgactggctgatggcaacatcctctgttgatgctacggtcaagctgtgggac
ctcagaaatattaaagacaaaagcagttatattgctgaaatgcctcatgaaaaacctgtc
aattctgcgtactttaatccaacagacagcaccaagctccttactacagaccagaggaac
gagatcagggtatattgttcatatgactggtctaaacctgaccaaataattgttcatcct
catcggcagttccaacacttaacgcccatcaaggcaacctggcatcccatgtatgacctc
attgtggctggccgttacccagatgatcaagtattagtcaatgataagagaactattgac
atttatgatgccaacagtggtgatcttgtgcaccagctgagagaccccaatgctgctggt
atcatatctctcaacaagttcagttcaaatggggatgtgctagcttctggaatgggctat
aacattttaatctggaaccgagaggacacactgaacagtattaatcggaaacaggcagcg
gagagagtggagagtggaggcagagctggaacctccagatcccagcgcagcacccagcag
cgcacgaacagaggtggaagagcagctgctgatgatgccaagctcaagaaaaagctagca
tcattgtcttcaacagagaccaaatcaaagaccaagagcaagaccgaatgcaagacatca
aaattgaagaaaaagtga
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