Megalobrama amblycephala (Wuchang bream): 125254187
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Entry
125254187 CDS
T08212
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125254187 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125254187 (exosc5)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125254187 (exosc5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125254187
NCBI-ProteinID:
XP_048024620
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All DBs
Position
LG19:3683952..3688517
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AA seq
219 aa
AA seq
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MMELDQSCSVLREYGSEQSLLSRPDGSSTFVQGDTSILAGVYGPAEVKVSKEIYDRATVE
VLIQPKMGLPSVRERAREQCVRETCEAALLLTLHPRSSLTVILQVVHDDGSLLSCCLNAA
CMALMDAGLPMNHLFCGVTCAISKEGQITTDPTARQEKESRALLTFALDSVERNVLMSST
TGSFSVHELQQCIAVSQKASEQIFQFYRDSVKRRYSKIQ
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgatggagttagatcaaagttgttcagttttaagggaatatggaagtgagcagagtttg
ttatcaagacctgacggctcctctacttttgttcaaggagatactagtatcctggctgga
gtttatggaccagctgaggttaaagtcagcaaggaaatctacgatcgtgctactgtagag
gttcttatccagcccaaaatggggcttccaagtgtccgggagcgcgcgagagagcagtgt
gtgcgcgagacctgcgaggcggctcttctgttgacgcttcatcctcgctcctctctcaca
gtcatcctgcaggtcgtccacgacgatggctctctgctgtcatgctgcctgaacgctgcc
tgtatggctctaatggatgcagggcttcccatgaaccacctgttttgtggtgtgacctgc
gctattagcaaagagggccagataacgacagaccccacggctcggcaggagaaggaaagt
cgagcgttgttaacatttgcacttgatagcgtcgagcgcaatgttttgatgtcatcgact
acaggctctttttcagtccacgagctgcagcagtgcatcgcagtcagtcaaaaggcttct
gaacaaatcttccagttttatagggattctgtgaaacgacgatattcgaagatacaataa
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