Megalobrama amblycephala (Wuchang bream): 125254192
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Entry
125254192 CDS
T08212
Symbol
dennd4a
Name
(RefSeq) LOW QUALITY PROTEIN: C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125254192 (dennd4a)
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125254192 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
125254192
NCBI-ProteinID:
XP_048024627
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All DBs
Position
LG19:complement(11899506..11946378)
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AA seq
1726 aa
AA seq
DB search
MEEKSLRVADYFVVAGLTDSSKPLDEDVHTEDGGHRSSAQLKAPITDVAVVIRSLGEEVP
RGFTCVECTPSGLSAELNGGSLMGPQIFLCYRRGRDKPPLTDLGILYEWKEKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSNSTLAVTDICVIVPGKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFTAGLLSRYPEEDYDSFPLPESVPLFCLPMGVSI
ECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQRTQLGLQANGLRP
DGSMTVHTNKSICLLSHWPFFDAFHNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
QDISCVDLDTNTITQKEERRSLTWKILPRKACKHLINTLSNLHQQLDEGYQMSREEGQME
AFMTEREPGCVGKSLETLEMEIQEAFLRFMAAILKGYRLYLLPITQAPSEKATDASSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSDKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEPPMVYSYSGFPVLNAQLCELQ
DGPRVPKATSAMRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLW
FICLPAYVSACHSKARVLHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVALFKQVWRRQT
THPKDTHLSDASDLDNVSHGSLDSSNDSAERASIDTDFTKMDSSDDRSSTGGQSDQGYDS
LSKEEVRLGGGEEQNPSPDMKEKKDRNSCSLSQTVLSKIEDSSLLVGTHPSATNGENNHF
LSEALTKTKRPNSLDIFGEKPIRPSTLDLTPGKTVGELCTESVAALIETDAVGGVVSPPK
VAVERTASCTVAMEKRVAMEREHIGVERSVSCSGALGRVVKRMGIEAGFDPLSLMVAETQ
VHSEGDNADTPTARRDLAEEIHHYMNNLSSPLSQRSLSVDLKGLQTPSPHSSPRMSAAAG
SPCTSQLQPQPRTRLFSSPSLPQGRVRRVREQRPTSLASPSSPTPSSSSFSMDSLLTPTL
DVFKSSFLSAGKGVAEKASRLYSRLSSQTSITQDLNSDRVSVSSLGSGDPDCSSLIESDS
CVDPDGLSSPQRDAAQPVTRPKRSPYRSSHCLESPSAPPRLFRQSSLTGPSLTITKALQT
SDVCSDSSLTQSTQNYAIEVRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGS
PFLPLLNVDIRNLGDQERSPSQDTHTCQTDTADELPQDYEVTGNLSSNGKKDPEPVTVPY
LSPLVLWKELESLLENEGDQAISSAAIVDHHPIVFWNLVWFFRRLDLPSSLPGLYLSSKH
YSKDVQPLQSCASEDSKNVLVQILWDNPRLHQDPIQPCYLLWKSYCANPAVSAALWEEEQ
SVSLELLQSVVKSIQRNDVYQPMSQILQVLGTRLGFVRQRSLYRDILFLALVALGKSSIN
IDAFDREYKMAYDRLTPSQVKMTHNCDRPPSAGVMECKRTFGLPNL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaaagccttcgtgtagcagactactttgttgtggcaggactcaccgactcc
tctaagcccctcgatgaagatgtccatactgaagatggtggtcaccggagctcagcacag
ctcaaggcgccgatcactgatgtggcggtggtgattcgatccctaggggaggaggtacct
cgagggtttacctgtgttgaatgcaccccctctggactctctgctgaactgaatggagga
agtctcatggggccgcagatcttcctctgctacaggagaggcagagacaaaccgccgcta
acagacctgggcatcctctatgagtggaaggagaaactgaagccggactgtcaaataata
cagaccacgccatctggccgccccgccaatatcagtagctcctcctcccaaaggatctac
atcacatatcggcgtgcctctgaaaatcactcaaactccacgctggctgtcactgacatc
tgtgtcattgttcctggcaagggagagacaccaccacatgctttctgcaaggtggacaag
aacctcaacagcagtatgtgggggtcctctgtgtacttgtgctacaaaaaatctttggcc
aaaaccaacacacttgcattcacagcaggtcttttgtccagatacccagaggaggactat
gattcctttcctttgcctgaatccgtacccctattttgcctaccgatgggagtgtccatt
gagtgctggccctctcataccaaatattctcttcctgtcttttcaacattcgttctcacg
ggcgcctctggagaaaaggtttatggtgccgccatacagttctatgagccctacccagaa
gaacatttgactgacaagcagcgaactcaactgggcctgcaggctaacgggctcaggcct
gatggatccatgactgtccacaccaacaaaagcatctgccttctctctcactggcccttt
tttgatgctttccataacttcttgaccttcctctacagatactccatctcaggtccacac
actctgcccattgagaagcatatttcccatttcatgcacaaggttccttttccttcctca
caaaggccacgtatcctggtgcagctgtctccacatgatagcctgatgctgagccagcct
gtttcctctcctctccctctgagtggaggaaggctctctacactgctgttgaacctcggc
ccgaagaatgcagtgactctgctggtgttagctgtgactgaacataagatcctggtgcac
tccttacgtccggccgtgcttaccagcgttaccgaggccctggtatcgatgatttttccc
ttccactggccatgcccgtacatacctctctgcccgctggccctggcagatgtgctcagt
gctccatgccctttcatcgtaggcgtggattcccggtactttgacctctatgagccaccg
caggacataagctgtgtggacctggacaccaacactataactcaaaaagaagagcgcaga
tccctgacctggaaaatcctgccaagaaaagcctgtaaacatctgatcaacaccctcagc
aatctccaccagcaactggatgagggttatcagatgagtcgtgaggaaggacagatggag
gccttcatgaccgagcgggaacctggctgtgttgggaagagtctggaaaccttggagatg
gagatccaggaggctttcctgcgcttcatggcagccatcttgaagggctaccgcttgtac
ctgttgcccatcacacaagctccgtctgagaaagcaactgacgccagttcactctttgat
ctgcaaggctttttgaagagtcgtgatcgatcccatcaaaagttttactccctcatgacc
aagactcagatgttcattcgtttcatcgaagagtgctcctttgttagtgataaggatgca
agccttgctttctttgatgactgcgttgacaagttgttcggcacagagaaaggagggaag
gtggacagcgataagccagaggacacaagacttattgaacttgacaaatcccaccgcagc
gagcacacggtctacatcaccccgccagagctgccggcacttccagaaggagaagagcca
cctatggtttatagctacagcgggttccctgtactgaacgcccaactctgtgagcttcag
gatggtcccagagtccccaaagcaacatcagccatgagacacatcagtcccatcagccca
gctgctattttcaggcgctcccaacaggagatcaaatcagcccagcggatggctaagacg
tactcctccatcccgcagatgtggtccaagtgtctcctcaggcattgtcatggtctgtgg
ttcatctgcttgcccgcgtatgtcagcgcctgccactctaaggcgcgggtgctgcatact
gcctacgacgtgctgagaaatatgcaggacaaaaagttgcagccccctgatgaggtgtgt
taccgggtcttgatgcagctgtgtgggcagtacggacagcctgttctggctgtccgggtt
ctttttgagatgaagaaagccggagtgcagcctaacgccataacctatggatactacaac
agggccgttctggagagcacatggccttcctcaactagagggggatacttcctttgggga
aagttgagaaatgtggttcggggtgtggcgctgttcaaacaagtatggaggaggcagacc
acccacccgaaagacacccatctctctgatgccagtgatctcgacaatgtcagccatggc
agtctggacagctctaacgattctgcggagcgagcttccattgatacagacttcactaaa
atggattccagtgatgacagatccagcacaggtggtcagtctgatcagggctatgactct
ctgtctaaagaggaggtgaggttaggaggaggtgaggagcagaacccttctccagacatg
aaagagaagaaggacagaaactcttgctcattgtctcagactgtactctcaaagatagag
gattcatcccttctggttggaacccatccatccgcaaccaatggggagaacaatcatttc
ctttctgaagccctcacaaagacaaaaaggccaaactccctggatatttttggagaaaag
cccataaggcccagcacattggatctaaccccgggtaagacagtaggagaactctgtact
gaatctgtcgcagcactgatagaaacggatgcagtggggggcgttgtgagcccacctaaa
gttgccgtggagaggactgctagctgcacggttgccatggagaagagagttgccatggag
agggagcacatcggcgtggagaggagcgtgagctgcagcggtgcacttggccgagtggtt
aagaggatgggtattgaagcagggtttgatcctctgtccctcatggtggctgagactcaa
gtccacagtgagggggataatgcagacacccccaccgcccgcagagaccttgctgaagag
attcatcactacatgaacaacctgagtagcccgttaagccagcggtctctcagtgtggac
ctcaaggggctccagaccccgtccccgcacagctctccccgcatgtccgcagcggccggc
tccccctgcacctcacagctccaacctcagccgcgaacacgactcttctcctcgccatcc
ctccctcagggtcgagtgcgcagggtcagggagcagcggcccacctccctggcctcccct
tcctcaccgactccctcctcttcctctttctccatggactctctgctcaccccgaccctg
gacgtgttcaagagcagcttcctctctgctgggaagggggtcgctgagaaagccagccga
ctgtattcacgactttcctcccagacgtccattacacaggatttaaactctgaccgggtc
agtgtgtcttcactggggtcaggtgaccctgattgctcctccctgatcgaaagcgattcc
tgtgtagaccccgatgggctctcttccccccagcgagatgccgcccagcctgtcacgcgg
cccaaacggagcccttacaggagcagccactgcctagaaagcccatccgcaccacctcga
ctcttccgacagtcctccctcactggtccgtcgctgacgataacgaaagctctgcagacc
tcagacgtgtgttctgattccagcctcactcagtccacgcagaattacgccattgaagta
cgtatgtccagttgttcacgctgtaacacctgtgagagtttggtgtatgatgaagagatc
atggctggttggacagctgacgactccaacctcaatagcacgtgccccttttgcggatct
ccgtttctgcccctgctcaatgtggacatcagaaacctgggtgaccaggaaagatcccct
tctcaagacacgcatacttgccagacagacaccgcagatgaacttccacaagattacgaa
gtcactggcaatctgtccagcaatggcaaaaaagaccctgagccagttaccgtaccctac
ctgagtcctctggtactttggaaagaactggagagcttgctggaaaacgagggagaccag
gccatctcgtctgcagccattgtggatcaccaccccattgtgttctggaatctggtgtgg
tttttccgtagactggacctgcccagcagcctgccgggactctatctgagctccaaacac
tacagcaaagatgttcagcctctgcaaagttgtgcatcagaagacagtaaaaacgtcttg
gtccagatcctgtgggacaaccccagactgcatcaggaccccattcagccctgctacttg
ctctggaaatcatattgtgcaaatcctgcagtatctgctgccctgtgggaggaggagcag
tctgtgagcttagagctgctgcagagtgtcgtgaagagcatccagaggaacgatgtctat
cagcccatgagtcagatactgcaggtactgggaaccagactgggcttcgtcagacaacgg
agcttatatagagacatcctgttcctggctttggtggctttgggcaaaagtagcataaat
atcgatgcgttcgaccgtgaatacaaaatggcatatgaccgtttgacacccagccaggtc
aagatgacccacaattgtgaccggccacccagcgctggagtcatggagtgcaaaagaacc
tttgggctgcccaatctgtga
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integrated database retrieval system
