Megalobrama amblycephala (Wuchang bream): 125254260
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Entry
125254260 CDS
T08212
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125254260
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125254260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_5
zf-RING_2
zf-C3HC4_4
U-box
zf-Nse
Prok-RING_4
Apolipoprotein
Fib_alpha
ECH_2
Baculo_PEP_C
zf-RING_6
DUF1664
FUT8_N_cat
Tweety
zf-RING_10
DUF4200
zf-RING-like
Exonuc_VII_L
CdaS_N
Nup88
PIN_8
FapA
TMPIT
Phage_GP20
Motif
Other DBs
NCBI-GeneID:
125254260
NCBI-ProteinID:
XP_048024767
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All DBs
Position
LG19:33478934..33491693
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AA seq
449 aa
AA seq
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MASLSEDDLSCPVCHEIFSVPVILSCSHSFCKECLQQFWRIRETRECPVCRRRSSKEEPP
PNLALKNLCESILKERNERRSSGSEEICSLHSEKLKLFCLEDKQPVCLVCRDSKQHDNHK
FRPIGEVVSSYKEDLNTTLKSLQEKLKHNENIKGEFEKTVQHIKSQAEHTERQIKQQFEK
LHQFLRDEEEATITALREEEEQKKQMMKEKLEEMNRHISALSHTIEDMEEMMKASDVCFL
KEFPVSKERVQSSQPDPQMASGALIHVPRYLGNLPFRVWKKMQDIIQNTPVILDPNTANP
RLVLSDDLTSVRDSGIDQPLPDNPERFDCYPCVLGSEGFNSGTHCWDVEVKESERWTLGV
TTATNQRKGGVFFSTGDVWSVGRRWFNQKLDRVRVNLDYDRGTMSFSDPVTNTHLHTLTT
TFTHTLFPVFNFSGSLRILPVNISNHHSL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactatctgaagatgatctttcttgtcccgtgtgtcatgaaatcttcagtgtt
cctgttattttatcatgtagtcacagtttctgtaaagagtgtcttcaacagttctggaga
atcagggaaactcgggagtgtcctgtctgcaggagaagatcctcaaaagaagaacctcca
cctaatcttgcgttaaagaacttgtgtgagtcgatcctgaaggagagaaatgagaggcgt
tcatcaggatctgaggagatctgcagtttacacagtgaaaaactcaaactcttctgtctg
gaggacaaacagcctgtgtgtttagtgtgcagagattcaaaacaacacgacaatcataaa
ttcagacccatcggtgaagtggtttcatcatataaggaggatctcaatacaacactgaag
tccttacaagagaaacttaaacacaatgaaaacattaaaggagagtttgagaaaacagtt
caacacatcaagtctcaagctgagcacacagagcgtcagattaaacagcagtttgagaag
cttcatcagtttctcagagatgaagaagaagctacaatcactgcactgagggaggaagag
gagcagaagaagcagatgatgaaggagaagctggaggagatgaacagacacatctcagct
ctttcacacacaatcgaagacatggaggagatgatgaaagccagtgacgtctgctttctg
aaggagtttccagtctcaaaggaaagagtccagagctcacagccggatccacagatggct
tctggagctttgattcatgtgccacgttacttgggcaacctaccgttcagagtctggaag
aagatgcaggacatcatccaaaacactcctgtgattctggatccaaacactgcgaatcca
cgtctcgtcctgtctgatgatctgaccagtgtgagagacagcggaatcgatcaacctctt
cctgataatccagagagatttgactgttatccctgtgttctgggttcagagggatttaac
tcaggaacacactgctgggatgtggaggttaaagagagtgaacgctggactcttggagta
actacagcaacaaaccagaggaagggaggtgttttctttagcactggtgatgtctggagt
gtggggcgcagatggtttaatcagaagcttgatcgagtgagagtgaatctggactatgac
agaggaacgatgtcattctctgatcctgtaactaacacacatctacacacactcacaacc
accttcactcacacactctttccagtcttcaatttttctggctctctgaggatcttacca
gtcaatataagtaatcatcactccttgtag
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