Megalobrama amblycephala (Wuchang bream): 125254502
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Entry
125254502 CDS
T08212
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb02010
ABC transporters
mamb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125254502 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125254502 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mamb02000
]
125254502 (cftr)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
125254502 (cftr)
Transporters [BR:
mamb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
125254502 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
MMR_HSR1
DUF87
FtsK_SpoIIIE
AAA_23
Dynamin_N
T2SSE
DUF5805
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
125254502
NCBI-ProteinID:
XP_048025090
LinkDB
All DBs
Position
LG19:12963125..12998544
Genome browser
AA seq
1485 aa
AA seq
DB search
MQRSPVEDVSCLSRYFFWWTNPLMRKGFREKLRPSDVYQAPSQDAADTLAERLEKEWDRE
VASGRKKPSLLRALARCFIKPFLLFGFLLYIGEATKTVQPQLLGRVIASFDPAHEPERAN
GYFLAFGLGLLFTARFLLLQPAMFGLHRLGMQIRIALFSIIYKKTLKLSSRVLDKISTGQ
LVSLMSANLGKFDQSLGMAHFVWISPLQCILCTGLIWELIDVNSFCALAAISLLGVLQAF
LSHKMGPYKAQKVLLTNKRLALTSEIMENLHSVKAYGWEEIMETLIKNIRQDEVKLTRKI
GSLRYFYSSAYFFSAIFVIVAAVVPHALSRGINLRRIFTTLSYCMVLRMTVTRQLPGSIQ
MWYDTMRLIWKIEEFLSKEEYKLMEYDLSITELELKDVTASWDEGPGELLERIKQENKAN
GHHNGDAGLFFTNLYVTPVLKDISLNLKKGEMLAVTGSMGSGKSSLLMTILGELVPSSGK
IRHSGRISYSSQTAWIMPGTIRDNILFGLTYDEYRYKSVVKACQLEEDLAALPEKDKTPM
AEGGLNLSGGQKARVALARAVYRDADVYLLDAPFTHLDIATEKEIFDKCLCKLMASKTRI
LVTNKIEHMKRADKIILLHNGESFFYGTFSELQSERPDFSSLLLGLEAYDNISAERRCSI
LTETLHRVSVDESAGMRPERSSYRQVAPPMPKYIDERKASVIVNPLGAARKASFIQVPEE
EVRRTLPDRKFSLVPENELVDESFMGSDVYHNHGVHMAGQRRQSVLAFMTNAQGQGRRDH
LQSSFRRRLSVVPQSELASELDIYTRRLSDSTYDITGVLEEENIEACLVDEIDEIEEAFE
TTKWNTYVRYVSNNTSLLYVLIFILIVAAAEVAGSVAGIFLITDELWKEEQQRFDPNMTK
HSNMSSPGQNYAVIVTPTSSYYILYIYVATSESLLAMGFFRGLPFVHTMITISKKLHQKM
LRAVLSAPMSVLNTMKTGRIMNRFTKDMATIDDMLPLLMFDFVQLTLVVVGCILVVSIVR
PYIFLAATPLAIIFIVLRKYFLRTGQQLKQLETEARSPIFSHLIISLKGLWTIRAFERQG
YFENLFHKTLNTHTATWFLYLSTLRWFLFRADIIFVFFFTLAAWIAVGTNQDKPGEIGIV
ICLAMLILGTFQWCVATSIAVDGMMRSVDRVFKFIDLPSETPKPDKSKGSDLIIENTDAQ
ADSSWPNRGQIDVRNLTVKYTEGGHAVLKNLSFAVEGGQRVGILGRTGSGKSSLFNALLK
LVYTDGDISIDGVNWNKMPLQKWRKAFGVVPQKVFIFTGPFRLNLDPYGCHSDEELWRVT
EEVGLKTLIEQFPDKLDFQLEYGGYVLSNGHKQLICLARSILSRARILLLDEPSAHLDPI
TIKVLKKTLRQSFSTCTILLSEHKVEPLLECQSFLMMDKGQVKTYDSIQKLLNETSHLKQ
AISPAERLKLFPRRNSSMRTPQSKLSSVTQTLQEEAEDNIQDTRL
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcacctgtggaggatgtcagctgcctctcaagatacttcttttggtggaca
aaccctttaatgagaaagggttttagggagaaactgaggccatctgatgtgtatcaagct
cccagtcaagatgcagcagatactcttgcagagcgtttggaaaaagaatgggacagagaa
gttgcgtctggaaggaaaaaacccagtctcctgcgagccttggcacgatgcttcataaaa
ccttttctgttatttggcttcctcctatatataggcgaggctacaaaaacagttcagcca
cagcttttagggcgggtcattgcgtcatttgacccggcccatgaaccggagcgagccaat
ggttactttcttgcctttggtcttggcttgctatttactgcccgctttctcctgctccag
cctgccatgtttgggctgcaccgcctgggcatgcagattagaattgcactctttagcata
atctataaaaagaccttgaaactttctagccgagtcttggacaagatcagcacaggtcag
ctggtcagtctgatgtcagctaacctgggcaaatttgaccagagcctgggtatggcccat
tttgtttggatatcaccattgcaatgcatcctgtgtacagggcttatctgggaactcatt
gatgtcaacagcttctgtgcacttgctgccatctctttattgggtgtcttgcaggccttt
ctctcacataaaatgggtccttacaaagcacaaaaagtgctattgaccaacaaacggttg
gctctgacctcagagatcatggagaacctgcattcggtgaaggcctacggctgggaggag
ataatggagaccctcattaagaacatcagacaggatgaggtgaagttgaccaggaagatt
ggctccctgcgctacttctacagctctgcatactttttctcagccatctttgtgattgtg
gctgcagtggtgccccatgccctgagtcgcggtatcaacctgcgtcgcatattcaccact
ctctcctactgtatggtgctgcgtatgactgttactcgacaactgcccggctccatccag
atgtggtacgacaccatgcggcttatttggaagattgaagaatttcttagtaaggaagaa
tacaagttaatggagtacgatctcagcatcacagagctggaacttaaagatgtgactgct
tcttgggatgagggtcctggtgaacttctagaaaggataaaacaggagaacaaagctaat
ggccatcacaatggagatgcaggcctcttcttcaccaacctttatgtgactcctgtactg
aaggacatcagcttaaacctgaagaaaggagagatgttggctgttaccggttctatggga
tctgggaagagctcattgttgatgaccatcctcggggagctggttccctcctctgggaag
atccgacacagcggccgaatctcctactcctcccaaacagcctggatcatgcctggaacc
atccgagacaacatcctttttggcctgacctatgatgagtatcgttataagagtgtggtc
aaagcatgccagctcgaggaggatctggctgctcttcctgagaaggataagacgcctatg
gcagaggggggtttaaacttgagtgggggtcagaaagcacgtgtagccctggccagggct
gtttacagagatgctgatgtttacctgcttgacgcaccatttactcacctggatattgca
acagaaaaagaaatatttgacaaatgtctgtgtaagctgatggcctccaagacacgcatc
ttggtaacaaataagattgagcatatgaagcgagccgataagatcatactgctccacaat
ggtgaaagttttttctacggcaccttttcggagcttcaatcggagcgtcctgattttagc
tctttgcttctgggtttggaggcctatgacaacatcagcgctgagcgccgctgctctatc
ctgacagagactctccaccgcgtctcggtggatgagagcgcaggcatgcgacctgaacgc
tcctcttatcgccaggtggccccgcccatgcccaagtacatagatgagagaaaagcttca
gtgatcgttaacccccttggagcagctcgtaaggcatctttcattcaggtaccagaggaa
gaggtccgcaggacattacctgaccggaagttctccctggtacccgagaacgagctagta
gatgaatccttcatgggaagcgacgtctatcataaccatggggtgcacatggctggtcag
aggaggcagtcggtgttagccttcatgaccaatgcacaaggccagggccgtcgtgaccac
cttcagtcttctttccgcagacggctgtccgtcgtgcctcagagcgaactggcttctgag
ctggacatctacactcgccgcctgtcggacagcacgtatgacatcaccggggtcctagaa
gaagagaacattgaggcatgtttagttgatgaaattgatgaaatagaggaggcatttgaa
acaacaaagtggaacacatatgtcagatatgtgtcaaataatacaagtcttctttatgta
ctgatcttcatcctcattgttgcagcagctgaggttgcaggatctgtagcagggatcttt
ctgataactgatgaactttggaaagaagagcaacagcgatttgacccaaatatgacaaag
cactccaacatgtcttcacctggacaaaactatgcagtcatcgtgacccccactagcagc
tattacattctctatatctacgtagccacgtcagagagcctccttgcaatgggatttttc
cggggtcttccatttgtgcacactatgatcacaatctccaagaaactgcaccagaagatg
ctgcgtgctgttctcagtgcacccatgtctgtgctcaataccatgaagacaggccgaatc
atgaataggttcaccaaagacatggccacaatagatgacatgcttcctctcctcatgttt
gactttgtccagttgactctggtggtggttggatgtattcttgtggtgtccatcgtgcgg
ccgtacatattccttgcggctactcccctggccattattttcattgtgttgaggaagtac
tttctccgtaccggtcaacagcttaaacagctggagacagaagctcggagccccattttc
tcccacctcatcatctccctgaagggtttgtggacaatcagggcctttgagaggcaaggt
tactttgagaacctgttccacaagaccctcaacacacacacagccacctggttcctctat
ctgtcgaccctacgatggtttctcttccgcgccgacatcatcttcgtgttctttttcacg
ttggccgcctggattgcggtaggaaccaaccaggataaaccgggtgagattggtatcgtc
atatgcctggcaatgctcattctaggcaccttccagtggtgtgttgccaccagcattgcg
gtagatggaatgatgcgttctgttgaccgggtgtttaagttcatcgacctaccgtccgag
acacccaaaccagacaaaagcaaaggctcggatctgattatagagaataccgacgcacag
gctgactcaagctggcctaatcgaggtcagatcgatgtgcggaatttaacagtcaaatac
acagaagggggtcacgctgtccttaagaacctctccttcgctgtggagggtggacagagg
gtgggcatcttgggccgaacaggttctgggaagagttctctgttcaatgctctcctgaag
ctggtttacacagatggagatatctccattgacggggtcaactggaacaaaatgccactt
cagaagtggaggaaagcctttggcgtggtgcctcagaaagtcttcatctttacgggacca
ttccgcttgaacctagacccttatggctgccatagtgatgaggagctgtggcgggtcacg
gaggaggtcggactcaagacactgattgagcagtttccagacaaactggacttccagctg
gaatacggaggttatgtactgagtaacggccacaaacagctcatatgtctggctcgctcc
atcctcagcagagcacggatcctcctcctggacgagcctagcgcccatctcgatccaata
acaataaaggtgttaaagaagacattgcgacagtctttttccacgtgcactatattactg
tccgagcacaaagtggaaccgctgctcgagtgccagtctttcttgatgatggataagggt
caggtgaagacctacgattccattcagaagctgctgaatgaaaccagtcatctaaagcag
gccataagtccagccgagcgcctcaaactcttccctcgtcggaattccagcatgcgcacc
cctcaatccaaactaagctctgtcactcagacactacaggaggaggcagaggacaatatc
caagacactcgcctctga
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integrated database retrieval system
