Megalobrama amblycephala (Wuchang bream): 125254628
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Entry
125254628 CDS
T08212
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125254628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125254628
03036 Chromosome and associated proteins [BR:
mamb03036
]
125254628
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125254628
Coactivators
SAGA/TFTC/STAGA complex
125254628
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125254628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
125254628
NCBI-ProteinID:
XP_048025275
LinkDB
All DBs
Position
LG19:904074..1022244
Genome browser
AA seq
904 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGQSDPPAAQPENARPGSAKQQQQQQAG
GRAQLPAHVDSPSEPQQQAQQQQNARKAARNPDSDPKDASMDKHAKALEKESPLKSHGSI
IIITTAAASDGASAPAPGNKGESPRDTRKKHPANARARRSSASHSLNGNGGGATSASASP
STSSPSSTTFTVPSNPQAIALDRGTPTIALHRLPRHIIASIAQNGNGTSVSALVQQGARI
GAAGAQVNHSKAPGNNTKPPPTSSPPAAATAAPVKPAVSVSAAPVIRPAQTQPQPPAQQR
VVTPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQNSISPRP
STPTSVATFRVTTPQSPVSTPAIRPAPAAQTKLVQSSSPSVAAQTSTATGPAKAPVAAAV
AVTAPQQVQPALGPQGPLTQMPLAPQSAAAPAPGAPVVSQEMQENVKKCKNFLATLIKLA
SHNSPSPETSRNVKALVQDLLDAKIDPEEFTSRLQSELKSSPQPYLVPFLKKSLPALRLS
LLNSQQSLTQPLQPNKTSVTPVQTGVSVRPHQPNSTAVLPQGIKRAAGPGGQIRMPVVIT
QTVRATGTLGKPVAFQTGKSPAGVSIQLSGNQKNKLNDPGGGSFRDDDDINDVASMAGVN
LNEESARILATNSDLVGTQIRSCKDEAFLPTGLLHRRILETAKKFGVTDVPLEAVNFISH
ATQSRLRTVLEKVSSIAQHRMDSCKEDEWYEQSSDARSQLKFFEQLERMEKQRKDERERE
ILLRAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPG
ATTTGVEVSGSSADSPAGSSASSSSSRQYSRQRITRVNLRDFIFYMEQERETSRSLLLYR
ALLK
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgagaaagcc
gtgagcgatctagtgggctcgctggagtctcagctggtgggccagagcgacccgcccgcc
gcgcagcccgagaacgctcgcccgggcagcgcgaagcagcagcagcagcagcaggcagga
ggaagagcgcagctgcctgctcatgtagactctccatcagaaccacaacaacaagcacag
cagcagcagaacgcgcggaaagcggcgcgcaacccggattccgacccgaaagacgccagc
atggataagcacgccaaagccctggagaaggagagccctctgaagtcacatggcagcatc
atcatcatcaccacggctgcagcatccgacggggcatccgctcctgcaccgggcaacaaa
ggtgagagcccgagggacacccgcaagaaacacccggctaacgcgcgcgcgcggcgctcc
tcagcgtcccacagtctcaacggcaacggaggaggcgcaacatcagcatcagcatcaccc
agcacctccagcccgagcagcacgactttcaccgtgcccagtaacccgcaggcgatcgcc
ctggaccgcgggacgcctaccatcgcgctccaccggctcccgcgtcacatcatcgccagc
atcgcgcagaatggaaacggcacgtccgtgtccgcgctggtccagcagggcgcgcgtatc
ggagctgcgggcgcgcaggttaaccacagcaaagcacccgggaacaacacgaaacccccg
ccgacctcctcgcctcccgctgcggccacagcagcgcctgtcaaacccgctgtcagtgtc
agtgcggctccggtcatcagacctgcgcagacgcagccgcagccgcctgcgcaacagagg
gtcgtaacgccgcagctgattgtcagaccaccgcaacaacaaactactatacagctgccg
cccggattcaccatccctccaggtatggtgctggtccggacagagatgggtcagctggtg
atggttcctcagcaggctctggctcaggctcaggcccagaacagcatctcaccgcgaccc
tccacgcccaccagcgtggccaccttcagggtcacgaccccgcagtctcctgttagcact
ccggcgattcgtcccgctcctgcggctcaaactaaactggtccagtccagttcaccgagt
gtcgcggcccagaccagcactgcaaccggccccgctaaggcccctgtggcagccgccgtg
gcagtgacagctccccagcaggtccagccggccttgggcccccaggggcccctcactcag
atgccactggccccgcagagcgcagccgccccggcccccggagctccggttgtctcccag
gagatgcaggagaacgtgaagaagtgcaagaactttttggcgacgctgatcaagctggcg
tcccataattccccttccccagagacgtctcgaaacgtgaaggcgctggtgcaagattta
ctggatgcaaagatcgatccggaggagttcaccagccggctacagtccgagctgaagtcg
tctccgcagccttacctggtccctttcctgaagaaaagtctccctgcgctgcgtctgtct
ctcctgaacagccagcagtctctcactcaacctctacagcccaacaaaaccagcgtgacg
ccggtccagacgggtgtcagtgtgcgtccacaccagcccaacagcaccgctgtactgccg
caaggtatcaagagggcggcgggtcctggaggtcagatacggatgcccgtggtcatcacg
cagacggtgcgagcgacaggtactttagggaagcctgtagctttccagacgggcaaaagc
cctgcgggcgtctccatacagctctcaggaaaccagaaaaacaagctgaatgacccgggg
ggaggctcgttcagagatgatgatgatatcaacgatgtggcgtctatggccggcgtgaac
ctcaacgaagagagcgctcgtattctagcaaccaactctgatctggtggggacgcagatc
cgctcctgtaaagacgaggccttcctgcccacaggtctgttacaccggcggatactggaa
acagctaagaagtttggagtgacggacgtaccgctggaggctgtgaacttcatttctcac
gccacccagtccagattaaggacggtgctggagaaagtttcctccatcgcccagcacaga
atggactcgtgtaaggaagacgagtggtacgagcagtcgtctgacgcgcgctcgcagctc
aagttttttgagcagttggaacggatggaaaagcagaggaaagacgagcgagagcgagag
attctcctccgagcggcgaagagtcgctcgcggcaagaagatccagaacaagcccgtctg
aagcagaaagcaaaggagatgcagcagcaggaactcgcccaaatgagacaacgagacgcc
aatctgacggcactcgccgccatcggccctcggaaaaaacgcaaggtggactcaccggga
gctacgaccacaggcgtcgaggtgtcggggagttcggcggattctccggccggatcgtcg
gcctcctccagctcgtcacggcagtattcccgccagagaataacacgtgtcaatctcagg
gacttcatcttctacatggagcaggagagagagacgagcagatctctcttactgtaccgc
gctctcctgaagtag
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