Megalobrama amblycephala (Wuchang bream): 125254713
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Entry
125254713 CDS
T08212
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125254713 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125254713 (trip12)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125254713 (trip12)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
HECT type E3
125254713 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
125254713
NCBI-ProteinID:
XP_048025421
LinkDB
All DBs
Position
LG19:complement(27216531..27298095)
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AA seq
2096 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANSLPESRRSNSKASKAP
PSSAVGSARGHASRRNSLSLSVGSHSIPDPDLEAAGTSGQQGRREGSSTRALKRSSAAEP
NITFSPSPAKRPKAVSSHLFESSASGPSAPATSPEVTEPRKAPPSVSTKSKKRRLAAEPA
PARALSKKTASYPGPSGVSSTPSQKRKKADVSSLSSSSSSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSCASSSSSSSSSSSAATGANSCAPQGARLKQGK
DQSKARRSRSASSPSPRRSSRDKEQNKSAGSSKFDWTSRFNSKVNLPKARLSLPGSAKAE
TSSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKR
GTAEARRQEKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEM
GRLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAA
IEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAV
VVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQ
RNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEEN
LLQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETL
RFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTT
EGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTG
TARAIQRKPNPLANPNTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAG
PAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQ
KLPDVFSVYFRREGVMHQVKNLAESEVFLTSPPKACTSGTASLCTTTITTATTTAASNVT
PDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGKLGTQTNSANSEPSRTAGVSGLARVPPKDSVSNNRDKIKAW
IKEQASKFVERYFNSESVDGSNPALNVLQRLCSATEQLNLQVDSGVECLEEISSIVSESD
VSSFEIQHSGLVKQLLLYLTSNSERDIVSRDERIKRFLHVFFGCPIPGQEPLGRLDPTEN
GPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCT
NVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNS
GSVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIW
YKPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNPLESYLICG
PPEGITFDDPSMEVILLLRVLHSISRYWFYLYDNAACKEIIPTGEFINSKLTAKANRQLQ
DPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDS
QDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYAL
VSQELQRADLGLWRGEEVTLSNPKAGSQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMK
FRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHETSISSHDLVNIDPGVAKSIQHLEDII
RQKKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIH
NLEEYLRLVVYWTLNEGVSRQFDSFREGFESVFPLHHLQYFYPEELDQLLCGSKSESWDV
KTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPL
TIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccacacacttgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaattccctacctgaaagtagaagatctaattctaaggcttccaaagcccca
cccagctctgccgtcggctccgcccgcggccacgcctctcgaaggaacagcctctcttta
tctgtgggttcacactcgattccagatccagacttagaagcagcaggaacttcaggacag
caagggagacgggagggcagcagcacccgcgctctcaaacgcagctctgcagcagagccc
aacatcaccttttcgcctagcccggccaagcggcccaaagctgtgtccagtcaccttttc
gaaagctcagccagtgggccatcggcccccgcaacctcacctgaagttacagagccgagg
aaagctccgccgtctgtcagcaccaagtccaaaaagagacgattagcagccgagccggct
cctgccagagccctgagcaagaagaccgcgtcctaccctggccccagtggggtctcgagc
accccctctcaaaagcgcaagaaggccgacgtctcttcgttgtcgtcctcttcttcctcc
tccctccccagctcaagcagcgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagc
accgtgactgactcctcctcttcctgtgcctcttcctcatcatcctcttcctcttcctcc
tcggctgccacaggcgccaacagctgtgcccctcagggcgcccggcttaagcagggcaag
gaccagagcaaagcgcggcggtcgcgctctgcatcctccccttccccccgtaggagcagc
cgggataaagagcagaacaagtctgccggctcctccaagtttgactggacgtcccgcttc
aactccaaagtcaacctgccaaaggccagactgtccctgccaggatcggccaaggctgag
acctcctccaagcctgggccctccggactgcaggccaaactagcaagtttgaggaagtcc
actaagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgt
cagaagaccacgggctcttgcgccagcaccagtcggcgaggctcaggcctgggcaagcgc
gggactgccgaagctcgccgacaggagaaaatggccgactctgacaacaaccaggatggg
gccaattcatcggccgcgcgcacagaggaaacgccccaaggggcgtcagcgtctagctca
gtagctggagctgttggcatgaccacctctggagagagtgaatcagatgactctgaaatg
ggaagactgcaagctctgctggaggccaggggccttcctcctcacctgtttggccccttt
gggccccgtatgtcacagctgtttcataggaccattgggagtggagctagctcaaaggca
cagcagctgctgcaggggctgcaggctacaggtgacgaatcccagcaactccaggctgct
atagagatgtgccagctgctagtgatgggtaacgaggagacgctgggaggattccctgtc
aagagcgttgtacctgccctgatcacactattacagatggagcataattttgatattatg
aatcatgcatctcgcgccctcacctacatgatggaggctctgccgcgctcctcggctgtg
gtggtagacgccatcccagtcttcctggaaaagcttcaggtaatacagtttattgatgtg
gcagaacaagccttgaccgctctggagatgttgtcacggaggcacagcaaagccatctta
caggctggaggtctagctgactgtttgctgtacttggagttcttcagcatcaatgctcag
aggaacgcgttagccatcgctgctaactgctgccagagcatcacgccggacgagtttcac
tttgtcgctgactctctgcccctgctcactcagagactcacacaccaggataaaaaatct
gtcgaaagcacttgtctctgttttgccaggctggtggacaactttcagcatgaggagaac
ctgttacagcaggtggcgtcgcgggacctgctgaccaacatccagcagctgctggttctt
actccacccgtgctcagctccggcatgttcatcatggtagtgcgcatgttctctctcatg
tgctccaattgcccatgcttggccgtgcagctcatgaaacagaatatagcagagaccctg
cgtttcctgctctgtggagcatctaatgggagctgtcaagaacagattgaccttgttccc
agaagcccccaggaactttatgaactcacctcacttatttgtgagctgatgccatgtctg
cccagagagggcatctttgcggttgatgccatgctgaagaaaggcagtgcccagactaca
gagggtgccatctggcagtggagagatgacagaggcttgtggcacccttacaaccgcatt
gacagtcgtatcattgaaactgcacaccagaacggagaagatgagataagtctgtcgaca
ctcggccgtgtctacaccatcgacttcaactctatgcagcagataaatgaagacactggc
acagcccgtgccattcagaggaaacccaaccctctagccaaccccaacacaggagggcac
ttggaggtgcggcgagaggacgcacgcgctcagctgatgaaagaggaccctgagctggcc
aagtgcttcataaagactctgtttggggttctttatgaggtgtacagctcctcagccggg
cctgccgtcagacacaagtgccttagagccatcctccggatcatctacttcgcagatgca
gagctgcttaaagatgtactgcgcaaccatgctgtgtctagtcacatagcttccatgctg
tccagtcaggacctgaagattgtagtgggctctctgcagatggctgagatcctcatgcag
aagctaccagatgttttcagtgtttatttcaggcgagaaggtgtgatgcaccaggtaaag
aacctagctgaatccgaagtgttcctcaccagccctccgaaagcgtgcaccagcggcaca
gctagtctttgcaccaccaccatcaccacagcaaccactacagctgcctctaacgtcaca
cctgacttgggctcccccagtttccagcacagcatggacgactcactggacctcagtccg
cagggtaggctgagtgatgttctgaaaagaaaacgccttcctaaaagaggaccgaggcgt
cccaagtactccccacccagagacgatgacaaagtggataatcaggctaaaagtccaaca
accacacaatcccccaagtcctctttcctggccagtttgaatcccaagacctggggtaag
ctagggactcagacaaacagcgccaactcagagccctcgcgcactgcaggggtcagtggt
ctggcacgagtgccgcctaaggactctgtttcaaacaacagggataagataaaggcttgg
ataaaggaacaagccagtaagtttgtggagcgttactttaattctgaaagtgtggatgga
agcaaccctgcactgaatgtcctgcaaagactctgcagtgccacagaacagctgaacttg
caggttgacagtggtgtagagtgtctagaggagataagcagtattgtatctgaatcggac
gtgtcctccttcgagatccagcatagtgggcttgtgaagcagctgttgttgtatcttaca
tcaaatagcgaacgggacattgtcagtagagatgagagaatcaagaggttcctgcacgtg
ttcttcggctgcccgataccagggcaggaacctctggggcgtttggacccaacagagaat
ggcccactgctagcactggtgcacaagatgaacaactgccttagtcagatggaacagttt
cctgttaaagtgcatgattttcccagtggaaatggcaatggaagcaggggttcacaagcc
cttaagttctttaacacccatcagctgaagtgccagctgcaaagacacccagactgcacc
aatgtcaagcagtggaagggcgggccggtcaaaattgaccccttggccctggtacaggct
attgagagatacctcgtggttagagggtatggaaggatcagggaggaggatgaagacagt
gatgatgatggttccgatgatgagattgatgaatctttggctgcccagttcttgaattct
gggagtgtacgtcacaggctgcagttctacataggagagcacctgctgccgtacaacatg
actgtttatcaggctgtcaggcagttcagcttacaggccgaggaggaaagagagagcaca
gatgatgaagcaaaccctctgggacgtgctggcatctggaccaaaacacacactatatgg
tataagccagtcagagaggatgaggagggttgtaaagacgctgtcggagggaagaggggt
cgtgcacaaactgctcccactaaaacctcccctcgaaatgccaaaaaacaagacgaactg
tggcatgagggtgtgtgtcccagtgtgacaaatccgttagagtcatacctcatttgtggt
cctccagagggcatcacttttgatgacccttccatggaggtgattctgctgctgagggtc
ctgcactccatcagtagatactggttctacctgtacgacaatgctgcatgtaaggagatc
attcccactggtgagtttattaacagtaaactgacagcaaaggccaacagacagttgcag
gatccactggtcatcatgacaggaaacatccccacctggctgactgagcttggcaagacc
tgtccattcttcttcccgtttgacacacggcagatgctcttctatgtgacggcatttgac
cgcgatcgcgccatgcaacgcctactcgacaccaaccctgagattaaccagtctgactca
caagacagccgtgtcgctccacgccttgacaggaagaagagaacgataaaccgtgatgaa
ctcctgaagcaagcggagtcagtaatgcaagatctcgggagttccagagccatgctggaa
attcaatacgagaacgaggtgggaacaggtctcggccctacgcaagagttctatgctctg
gtgtctcaggagttgcagagggctgatttgggtctttggagaggagaggaagtcactctc
tccaaccctaaagcagggagtcaggagggtacaaagtacatgttcagttccaggggtttg
tttgctgtaccatttggacgaactaccaaaccagctcacatcgccaagatcaaaatgaag
tttcgttttcttgggaaactcatggctaaagcgatcatggacttcagattgttggacttg
cctttaggtttgccattctataagtggatgctgaggcacgagacctccatcagctctcat
gacctggttaacattgatcctggtgtcgccaaatccatccagcacttggaggacatcatc
cgccaaaagaagagaatagagcaggacagatcacatactcgggagaccctgcagcaggcc
ttggagagtctcaacatgaacggctgctcggtggaagatctggggctggacttcactctg
cctggattcccaaacatcgagttgaaaaaagggggcaaagatgtgccagtcaccattcac
aacctggaggaatacctcagattggtggtctactggacactcaatgagggcgtctcccgg
cagtttgattcatttagggaaggatttgagtctgtcttccctctgcaccacctgcagtac
ttctatcctgaagagctggatcagttgttatgtggcagcaagtcagagtcctgggatgtg
aagacactaatggagtgctgcagaccggaccacggctacacacatgacagccgtgcagtg
cggttcctgtttgaggtgctgagcagttttgatgcggagcagcagagacttttcctgcag
tttgtcacagggagccccagacttcctgtcggaggattccggagtttgaaccctcccctc
accatcgttcggaagacgttcgagtcaacggagaacccagacgacttcctcccgtcggtg
atgacgtgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgag
aaactgttgattgctgctcgcgagggccagcagtctttccatctgtcttga
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integrated database retrieval system
