Megalobrama amblycephala (Wuchang bream): 125254928
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Entry
125254928 CDS
T08212
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125254928 (fxr1)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125254928 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
125254928 (fxr1)
mRNA cycle factors
Stress granule specific factors
125254928 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
125254928
NCBI-ProteinID:
XP_048025698
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Position
LG2:complement(29871973..29885573)
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AA seq
665 aa
AA seq
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MEELTVEVRGSNGAYYKGFVKDVHDDSLSISFENNWQPERQVPFNDVRLPPPADGKKEIA
EGEEVEIYSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNRNKA
VTKNTFFKCTVPVPDDLSAACENEHAHKDFKKAVGAIRIVYSPEQSELIVLSMNEATVKR
VSLLSDMHLRSIRTKLMLMSRNEEATKHLESTKQLASAFQEEFTVREDLMGLAIGSHGSN
IQQARKVPGVTAIELDEETRTFRIYGESTEAVQKARNYLEFLEDSVQIPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNKLPRQEGMVPFTFVGTKESISNVQVLLEYHIAYLNE
VEQLRLERLQIDEQLRQIGMGYRPAPNRPADKDEGTSNTTLHVNRSYSGRGRGRRGPGYT
SGYGTNSEQSYASETDSERKEELSDWSLAGEEPERNLRQQRDSRRRPGEGRGRGRGGPGG
RGRGSGRGASNSISSVLKDPDGNPYSLLDNTETDQTADTDASDSQMNTNRRRRSRRRRTD
EDTTVMDGMSESDNASLSENGLDDTEAKPQRRNRSRRRRFRPPEERQPVTVADYISRAES
QSRQRNPRDLRKNKKDMGQVEFISEHSPTEAVSNGPTKADDQSKTPQASAEKAPKAKPAV
VNGVS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattgacggtggaggtccgtggctccaatggagcttattataagggctttgtc
aaagacgttcatgatgactctctctccatttcatttgaaaataactggcaacctgaaaga
caagtccccttcaatgatgtgcgattaccacctcctgctgatggcaaaaaggaaatcgct
gaaggagaagaagtggagatttactccagagcaaatgagcaagagccctgtggctggtgg
ctagctaaagtgcgcatgatgaaaggagatttctatgtgattgagtacgccgcatgtgac
gcaacctacaatgaaatagtgacatttgaacgtctccgcccagtcaaccgcaataaagct
gtgacaaagaacacattctttaagtgtactgttcctgtcccagatgatctcagtgcagca
tgtgagaacgaacatgcccacaaggatttcaaaaaggcggttggagccattcggattgtt
tacagcccagagcaaagtgaactgattgtactgtccatgaatgaagccaccgtcaagcgt
gtctccctgctgagtgacatgcatttacggagcatccgcacaaaactcatgctcatgtcc
aggaacgaggaggcgacaaaacatttagagagcacaaagcagttggcctcagcgttccaa
gaggagttcactgtgagagaagatctcatgggtctcgccatcggaagccacggcagtaac
attcagcaagccagaaaggtgccgggagtgactgctattgaactagacgaggagactaga
accttcaggatttacggagagagtacagaggcggttcagaaagcaagaaattatctagag
tttctggaagattcggtgcagattcctcgtaatcttgttgggaaggttattggaaaaaat
ggcaaggtcatccaggagattgttgataaatccggtgtggtgagagtgcgcatcgaaggc
gacaatgacaacaaactcccccgacaggaaggaatggtgccatttacatttgttggaacg
aaggagagtatcagcaatgtgcaggtcctactggaataccatattgcttacctaaatgag
gtcgaacagctgcgactggagcggctgcagattgacgagcagctgcgtcagattgggatg
ggttacaggcctgccccaaatcgacccgccgataaggacgagggcacatctaacaccacc
ctccatgtcaatcgctcctactccggcaggggccgcggccgccggggtcccggatacacg
tctggctacggcactaactcggagcagtcgtacgcttctgagacagactctgagcgcaag
gaagagctgagcgactggtccctggcaggagaggagcccgagcgcaacctcagacagcag
agagacagcaggaggagaccgggagagggccggggccgaggacgtggaggacctggtggc
agaggccgtggctcaggacgaggagcatccaactccattagctcagtcctgaaagatcca
gatggaaacccatacagtctgttggacaatactgagactgatcagacagcagacacagat
gccagtgactcccagatgaacaccaaccgccgcagacgctcccgtcgccgccgcacagat
gaagacaccacagtgatggatggcatgagtgagtccgacaatgcctccctcagcgagaat
ggcctcgatgacactgaagctaaaccacagcggcgcaatcgtagccgccgccgccgtttc
cgccctcctgaggagaggcagccagttactgtggctgactatatatcaagagctgagtct
caaagcagacagagaaacccaagagacctgaggaagaacaaaaaggatatgggtcaagtg
gagttcatatcggagcacagccctactgaagctgtgagcaatggccccaccaaagcagac
gatcagagcaagacgccacaagcttccgccgagaaggcgccaaaagccaagccagctgtt
gtcaacggagtctcctaa
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